Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5029
         (532 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73909-2|CAD36493.1|  921|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z73906-15|CAD36486.1|  921|Caenorhabditis elegans Hypothetical p...    27   8.4  
Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical p...    27   8.4  
Z72505-5|CAE11304.1|  333|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.      27   8.4  

>Z73909-2|CAD36493.1|  921|Caenorhabditis elegans Hypothetical
           protein D2030.10b protein.
          Length = 921

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -1

Query: 331 MR*LKNKRRNHRFRQTC--LITKTAERFATRCFTISTQKVDVNTSTEILHNCRVKQKKQY 158
           MR L +  R     + C  L+          CF +STQ    +   +I  N R KQ  +Y
Sbjct: 675 MRELASSERIESILECCYGLVDDVRCLLLPNCFKLSTQHFATSLEQQIRKNIRQKQPAEY 734

Query: 157 VFHI 146
             +I
Sbjct: 735 YSNI 738


>Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical
           protein D2030.10a protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -1

Query: 331 MR*LKNKRRNHRFRQTC--LITKTAERFATRCFTISTQKVDVNTSTEILHNCRVKQKKQY 158
           MR L +  R     + C  L+          CF +STQ    +   +I  N R KQ  +Y
Sbjct: 675 MRELASSERIESILECCYGLVDDVRCLLLPNCFKLSTQHFATSLEQQIRKNIRQKQPAEY 734

Query: 157 VFHI 146
             +I
Sbjct: 735 YSNI 738


>Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical
           protein D2030.10a protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -1

Query: 331 MR*LKNKRRNHRFRQTC--LITKTAERFATRCFTISTQKVDVNTSTEILHNCRVKQKKQY 158
           MR L +  R     + C  L+          CF +STQ    +   +I  N R KQ  +Y
Sbjct: 675 MRELASSERIESILECCYGLVDDVRCLLLPNCFKLSTQHFATSLEQQIRKNIRQKQPAEY 734

Query: 157 VFHI 146
             +I
Sbjct: 735 YSNI 738


>Z73906-15|CAD36486.1|  921|Caenorhabditis elegans Hypothetical
           protein D2030.10b protein.
          Length = 921

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -1

Query: 331 MR*LKNKRRNHRFRQTC--LITKTAERFATRCFTISTQKVDVNTSTEILHNCRVKQKKQY 158
           MR L +  R     + C  L+          CF +STQ    +   +I  N R KQ  +Y
Sbjct: 675 MRELASSERIESILECCYGLVDDVRCLLLPNCFKLSTQHFATSLEQQIRKNIRQKQPAEY 734

Query: 157 VFHI 146
             +I
Sbjct: 735 YSNI 738


>Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical
           protein D2030.10a protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -1

Query: 331 MR*LKNKRRNHRFRQTC--LITKTAERFATRCFTISTQKVDVNTSTEILHNCRVKQKKQY 158
           MR L +  R     + C  L+          CF +STQ    +   +I  N R KQ  +Y
Sbjct: 675 MRELASSERIESILECCYGLVDDVRCLLLPNCFKLSTQHFATSLEQQIRKNIRQKQPAEY 734

Query: 157 VFHI 146
             +I
Sbjct: 735 YSNI 738


>Z72505-5|CAE11304.1|  333|Caenorhabditis elegans Hypothetical
           protein C50C10.8 protein.
          Length = 333

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +3

Query: 396 TRFNTTGIIIN*YYCEFISQ*FHFFIKQFVFTAPL*KLVTQWTVK 530
           T+    G + +   C FI+    FF   F F  P   L+T W  K
Sbjct: 59  TKLTLDGHLFSLLMCYFITNIAFFFSDLFRFNLPSSGLITSWCAK 103


>AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -1

Query: 331 MR*LKNKRRNHRFRQTC--LITKTAERFATRCFTISTQKVDVNTSTEILHNCRVKQKKQY 158
           MR L +  R     + C  L+          CF +STQ    +   +I  N R KQ  +Y
Sbjct: 675 MRELASSERIESILECCYGLVDDVRCLLLPNCFKLSTQHFATSLEQQIRKNIRQKQPAEY 734

Query: 157 VFHI 146
             +I
Sbjct: 735 YSNI 738


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,633,970
Number of Sequences: 27780
Number of extensions: 202619
Number of successful extensions: 404
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)