Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5021
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119199-1|AAM51059.1|  381|Drosophila melanogaster SD12984p pro...    65   6e-11
AE014134-985|AAF52302.4| 3489|Drosophila melanogaster CG14001-PA...    65   6e-11
AY119587-1|AAM50241.1| 1235|Drosophila melanogaster LD15137p pro...    28   6.8  
AE014298-1784|AAN09312.1| 1052|Drosophila melanogaster CG1848-PD...    28   6.8  
AE014298-1783|AAN09311.1| 1257|Drosophila melanogaster CG1848-PC...    28   6.8  
AE014298-1782|AAF48176.2| 1235|Drosophila melanogaster CG1848-PA...    28   6.8  
AB042818-1|BAB17234.1| 1257|Drosophila melanogaster LIM-kinase1 ...    28   6.8  
AB042816-1|BAB17233.1| 1235|Drosophila melanogaster LIM-kinase1 ...    28   6.8  

>AY119199-1|AAM51059.1|  381|Drosophila melanogaster SD12984p
           protein.
          Length = 381

 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 409 VQLGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFC 525
           VQ+ L  LKKLF EYTHP++PL++ E+DDKLY MLPLFC
Sbjct: 60  VQVSLTTLKKLFNEYTHPREPLSEQERDDKLYEMLPLFC 98


>AE014134-985|AAF52302.4| 3489|Drosophila melanogaster CG14001-PA
           protein.
          Length = 3489

 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 409 VQLGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFC 525
           VQ+ L  LKKLF EYTHP++PL++ E+DDKLY MLPLFC
Sbjct: 58  VQVSLTTLKKLFNEYTHPREPLSEQERDDKLYEMLPLFC 96


>AY119587-1|AAM50241.1| 1235|Drosophila melanogaster LD15137p
           protein.
          Length = 1235

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 448 LQIASSGASVQVGREMRNLSPRQIRTTPRKMPHAICASNS 329
           L +++S +SV+VGRE    +P +  T  RK+  A  AS +
Sbjct: 275 LPLSTSASSVEVGRERLYKTPGEQGTKARKLRQATNASTT 314


>AE014298-1784|AAN09312.1| 1052|Drosophila melanogaster CG1848-PD,
           isoform D protein.
          Length = 1052

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 448 LQIASSGASVQVGREMRNLSPRQIRTTPRKMPHAICASNS 329
           L +++S +SV+VGRE    +P +  T  RK+  A  AS +
Sbjct: 92  LPLSTSASSVEVGRERLYKTPGEQGTKARKLRQATNASTT 131


>AE014298-1783|AAN09311.1| 1257|Drosophila melanogaster CG1848-PC,
           isoform C protein.
          Length = 1257

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 448 LQIASSGASVQVGREMRNLSPRQIRTTPRKMPHAICASNS 329
           L +++S +SV+VGRE    +P +  T  RK+  A  AS +
Sbjct: 297 LPLSTSASSVEVGRERLYKTPGEQGTKARKLRQATNASTT 336


>AE014298-1782|AAF48176.2| 1235|Drosophila melanogaster CG1848-PA,
           isoform A protein.
          Length = 1235

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 448 LQIASSGASVQVGREMRNLSPRQIRTTPRKMPHAICASNS 329
           L +++S +SV+VGRE    +P +  T  RK+  A  AS +
Sbjct: 275 LPLSTSASSVEVGRERLYKTPGEQGTKARKLRQATNASTT 314


>AB042818-1|BAB17234.1| 1257|Drosophila melanogaster LIM-kinase1
           protein.
          Length = 1257

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 448 LQIASSGASVQVGREMRNLSPRQIRTTPRKMPHAICASNS 329
           L +++S +SV+VGRE    +P +  T  RK+  A  AS +
Sbjct: 297 LPLSTSASSVEVGRERLYKTPGEQGTKARKLRQATNASTT 336


>AB042816-1|BAB17233.1| 1235|Drosophila melanogaster LIM-kinase1
           protein.
          Length = 1235

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 448 LQIASSGASVQVGREMRNLSPRQIRTTPRKMPHAICASNS 329
           L +++S +SV+VGRE    +P +  T  RK+  A  AS +
Sbjct: 275 LPLSTSASSVEVGRERLYKTPGEQGTKARKLRQATNASTT 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,821,966
Number of Sequences: 53049
Number of extensions: 324887
Number of successful extensions: 560
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)