Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5018
(557 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 30 0.059
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 25 1.7
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 25 1.7
AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 24 2.9
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 23 5.1
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 5.1
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 23 5.1
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 23 5.1
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 23 5.1
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 23 5.1
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 23 5.1
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 23 5.1
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 6.8
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 9.0
AY255856-1|AAP13482.1| 248|Anopheles gambiae glutathione transf... 23 9.0
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 23 9.0
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 29.9 bits (64), Expect = 0.059
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 292 CKNLLHCRILRSCHCSRICT*NCAC 218
C L HC +C C C NCAC
Sbjct: 776 CFALCHCCEFDACDCEMTCPNNCAC 800
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 25.0 bits (52), Expect = 1.7
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = -2
Query: 358 NGKLDRCPNCNQVCRRAQFQDLCKNLLHCRILRSCHCSR 242
N L C CNQ+ ++C+ +C C C R
Sbjct: 213 NEALQACGTCNQITCSGISTEVCRRSCYC----GCQCRR 247
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 25.0 bits (52), Expect = 1.7
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -2
Query: 292 CKNLLHCRILRSCHCSRICT*NCAC 218
C L HC +C C C C C
Sbjct: 740 CFALCHCCDFYACDCKMECPKQCTC 764
>AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein
protein.
Length = 814
Score = 24.2 bits (50), Expect = 2.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 173 PNNGRTSLNGIHSNATRTVSSTDT*TMTRTQNST 274
P G +NG+ S+ + + ST + T N+T
Sbjct: 720 PGTGMAGINGLSSSWHKVLDSTQLRLQSTTDNAT 753
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 23.4 bits (48), Expect = 5.1
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 337 PNCNQVCRRAQFQ-DLCKNLLHCRILRSCHCSRIC 236
PNC + CR + L + +C+ R+CHC + C
Sbjct: 39 PNCAR-CRNHGLKIGLKGHKRYCKY-RTCHCEKCC 71
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.4 bits (48), Expect = 5.1
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 337 PNCNQVCRRAQFQ-DLCKNLLHCRILRSCHCSRIC 236
PNC + CR + L + +C+ R+CHC + C
Sbjct: 39 PNCAR-CRNHGLKIGLKGHKRYCKY-RTCHCEKCC 71
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 23.4 bits (48), Expect = 5.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 389 PNAISTRWAHC 421
PNA +T W+HC
Sbjct: 185 PNATNTVWSHC 195
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 23.4 bits (48), Expect = 5.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 389 PNAISTRWAHC 421
PNA +T W+HC
Sbjct: 185 PNATNTVWSHC 195
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 23.4 bits (48), Expect = 5.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 145 DDYKKYHINAQQWSHIV--KWDSFKCNTHSFKYRYVNNDTNAKFYNVI 282
D++ + + N + + V KW + T Y + ND N F N I
Sbjct: 116 DNFCEVYANGEVTTRSVGEKWFNMVNETTCMNYECLRNDANETFINSI 163
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 5.1
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +1
Query: 208 FKCNTHSFKYRYVNNDTNAKFYNVIDFCKG 297
F CN + F RY N Y KG
Sbjct: 560 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKG 589
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 5.1
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +1
Query: 208 FKCNTHSFKYRYVNNDTNAKFYNVIDFCKG 297
F CN + F RY N Y KG
Sbjct: 560 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKG 589
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 23.4 bits (48), Expect = 5.1
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +1
Query: 208 FKCNTHSFKYRYVNNDTNAKFYNVIDFCKG 297
F CN + F RY N Y KG
Sbjct: 446 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKG 475
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.0 bits (47), Expect = 6.8
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 526 ANHHARLQFEGAATRCFCCQNLPASKFSTTP 434
A H R E T C+ LP++ TP
Sbjct: 461 AGMHKRFWAEAVNTACYLQNRLPSAAVERTP 491
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 22.6 bits (46), Expect = 9.0
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -3
Query: 411 QRVEIAFGFLLVKNNFV*MVNLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVIV 247
++V ++ LL F ++ I P ++ ++ F F I CV VIV
Sbjct: 269 EKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVIV 323
>AY255856-1|AAP13482.1| 248|Anopheles gambiae glutathione
transferase o1 protein.
Length = 248
Score = 22.6 bits (46), Expect = 9.0
Identities = 6/38 (15%), Positives = 20/38 (52%)
Frame = +1
Query: 157 KYHINAQQWSHIVKWDSFKCNTHSFKYRYVNNDTNAKF 270
KY ++ +++ +++W + K +++ + + KF
Sbjct: 196 KYELDKERFGKLLQWRELMEKDDAVKQSFISTEDHTKF 233
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 22.6 bits (46), Expect = 9.0
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 391 WISACEK*FRLNGKLDRC 338
W + CE R+ KL RC
Sbjct: 1003 WSNVCEAAKRITSKLQRC 1020
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,277
Number of Sequences: 2352
Number of extensions: 9920
Number of successful extensions: 28
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -