Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5001
         (749 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK022586-1|BAB14113.1|  355|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AF084928-1|AAC67543.1|  395|Homo sapiens erythroblast macrophage...    31   3.3  

>AK022586-1|BAB14113.1|  355|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12524 fis, clone NT2RM2002145, moderately
           similar to Homo sapiens erythroblast macrophage protein
           EMP mRNA. ).
          Length = 355

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 474 ILNCNLYTRAATVARERRLGSCYPVTVQSYGYIIYIRQNK 355
           +L C  Y  A  +AR+  + SC   +++   +I  IRQNK
Sbjct: 133 LLRCGYYNTAVKLARQSGIESCLEFSLRIQEFIELIRQNK 172


>AF084928-1|AAC67543.1|  395|Homo sapiens erythroblast macrophage
           protein EMP protein.
          Length = 395

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 474 ILNCNLYTRAATVARERRLGSCYPVTVQSYGYIIYIRQNK 355
           +L C  Y  A  +AR+  + SC   +++   +I  IRQNK
Sbjct: 122 LLRCGYYNTAVKLARQSGIESCLEFSLRIQEFIELIRQNK 161


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,638,664
Number of Sequences: 237096
Number of extensions: 1774277
Number of successful extensions: 6054
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6049
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)