Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4995
         (753 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376...    29   3.0  
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032...    29   3.0  
06_03_1448 + 30235336-30236763                                         29   5.2  
06_03_1443 + 30182018-30183445                                         29   5.2  
06_03_1440 + 30166515-30167942                                         29   5.2  
06_03_1437 + 30151030-30152457                                         29   5.2  
06_03_1425 + 30084383-30085810                                         29   5.2  

>05_04_0124 +
           18232961-18236636,18236810-18237288,18237549-18237629,
           18238033-18238041,18238096-18238248
          Length = 1465

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -1

Query: 171 CLKLKLFSRLPISTISRLLNARYLKYRCLSYPCHE 67
           C+KL    +LP   + RL     LKY C  YP  E
Sbjct: 795 CVKLPPVWQLPFLEVLRLKRMERLKYLCYRYPTDE 829


>05_04_0122 +
           18198594-18202269,18202551-18202591,18203273-18203281,
           18203336-18203551,18204257-18204361,18204761-18204919
          Length = 1401

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -1

Query: 171 CLKLKLFSRLPISTISRLLNARYLKYRCLSYPCHE 67
           C+KL    +LP   + RL     LKY C  YP  E
Sbjct: 795 CVKLPPVWQLPFLEVLRLKRMERLKYLCYRYPTDE 829


>06_03_1448 + 30235336-30236763
          Length = 475

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 661 RREPMPWLAQGNRDMYMTGNI 723
           R  P+PW A+GN  MY+ G++
Sbjct: 241 RDMPLPWPAKGNWRMYLNGDV 261


>06_03_1443 + 30182018-30183445
          Length = 475

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 661 RREPMPWLAQGNRDMYMTGNI 723
           R  P+PW A+GN  MY+ G++
Sbjct: 241 RDMPLPWPAKGNWRMYLNGDV 261


>06_03_1440 + 30166515-30167942
          Length = 475

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 661 RREPMPWLAQGNRDMYMTGNI 723
           R  P+PW A+GN  MY+ G++
Sbjct: 241 RDMPLPWPAKGNWRMYLNGDV 261


>06_03_1437 + 30151030-30152457
          Length = 475

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 661 RREPMPWLAQGNRDMYMTGNI 723
           R  P+PW A+GN  MY+ G++
Sbjct: 241 RDMPLPWPAKGNWRMYLNGDV 261


>06_03_1425 + 30084383-30085810
          Length = 475

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 661 RREPMPWLAQGNRDMYMTGNI 723
           R  P+PW A+GN  MY+ G++
Sbjct: 241 RDMPLPWPAKGNWRMYLNGDV 261


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,779,677
Number of Sequences: 37544
Number of extensions: 265683
Number of successful extensions: 438
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)