Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4995
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069029-1|AAL39174.1|  213|Drosophila melanogaster GH01257p pro...    30   3.9  
AE014297-3810|AAF56475.1|  213|Drosophila melanogaster CG5107-PA...    30   3.9  
BT023600-1|AAY85000.1|   78|Drosophila melanogaster IP06720p pro...    29   9.0  
AF208486-3|AAF33204.1|   78|Drosophila melanogaster Brother of B...    29   9.0  
AF208486-2|AAF33203.1|   78|Drosophila melanogaster Brother of B...    29   9.0  
AF208486-1|AAF33202.1|   78|Drosophila melanogaster Brother of B...    29   9.0  
AE014296-2441|AAF49695.1|   78|Drosophila melanogaster CG12487-P...    29   9.0  
AE014296-2440|AAF49696.1|   78|Drosophila melanogaster CG13465-P...    29   9.0  

>AY069029-1|AAL39174.1|  213|Drosophila melanogaster GH01257p
           protein.
          Length = 213

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = -1

Query: 270 NLHNILCITKTSFFSGIR-----F*TLYKKSGFTKKKHCLKLKLFSRLPISTISRLLNA 109
           +LH+ LC T  S  S I+     F  L+K S    +K    LKL ++LP  T S  +NA
Sbjct: 133 HLHSKLCATDKSVGSSIKNSAKCFWKLFKASMRLTRKINKTLKLIAKLPADTSSCFVNA 191


>AE014297-3810|AAF56475.1|  213|Drosophila melanogaster CG5107-PA
           protein.
          Length = 213

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = -1

Query: 270 NLHNILCITKTSFFSGIR-----F*TLYKKSGFTKKKHCLKLKLFSRLPISTISRLLNA 109
           +LH+ LC T  S  S I+     F  L+K S    +K    LKL ++LP  T S  +NA
Sbjct: 133 HLHSKLCATDKSVGSSIKNSAKCFWKLFKASMRLTRKINKTLKLIAKLPADTSSCFVNA 191


>BT023600-1|AAY85000.1|   78|Drosophila melanogaster IP06720p
           protein.
          Length = 78

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 633 ILKTIKKVFLKDRPKLEIP 577
           +LKTIKKVF   +P  EIP
Sbjct: 30  LLKTIKKVFKNSKPSKEIP 48


>AF208486-3|AAF33204.1|   78|Drosophila melanogaster Brother of
           Bearded protein C protein.
          Length = 78

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 633 ILKTIKKVFLKDRPKLEIP 577
           +LKTIKKVF   +P  EIP
Sbjct: 30  LLKTIKKVFKNSKPSKEIP 48


>AF208486-2|AAF33203.1|   78|Drosophila melanogaster Brother of
           Bearded protein B protein.
          Length = 78

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 633 ILKTIKKVFLKDRPKLEIP 577
           +LKTIKKVF   +P  EIP
Sbjct: 30  LLKTIKKVFKNSKPSKEIP 48


>AF208486-1|AAF33202.1|   78|Drosophila melanogaster Brother of
           Bearded protein A protein.
          Length = 78

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 633 ILKTIKKVFLKDRPKLEIP 577
           +LKTIKKVF   +P  EIP
Sbjct: 30  LLKTIKKVFKNSKPSKEIP 48


>AE014296-2441|AAF49695.1|   78|Drosophila melanogaster CG12487-PA
           protein.
          Length = 78

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 633 ILKTIKKVFLKDRPKLEIP 577
           +LKTIKKVF   +P  EIP
Sbjct: 30  LLKTIKKVFKNSKPSKEIP 48


>AE014296-2440|AAF49696.1|   78|Drosophila melanogaster CG13465-PA
           protein.
          Length = 78

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 633 ILKTIKKVFLKDRPKLEIP 577
           +LKTIKKVF   +P  EIP
Sbjct: 30  LLKTIKKVFKNSKPSKEIP 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,467,262
Number of Sequences: 53049
Number of extensions: 490725
Number of successful extensions: 897
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)