BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4993
(578 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071664-1|AAL49286.1| 161|Drosophila melanogaster RH01665p pro... 176 2e-44
AE013599-2365|AAF57940.2| 161|Drosophila melanogaster CG6426-PA... 176 2e-44
AE013599-2366|AAF57939.1| 161|Drosophila melanogaster CG6421-PA... 155 4e-38
AL031863-2|CAA21317.1| 161|Drosophila melanogaster EG:EG0003.8 ... 155 5e-38
AY071760-1|AAL49382.1| 161|Drosophila melanogaster RH65675p pro... 153 2e-37
BT022481-1|AAY54897.1| 163|Drosophila melanogaster IP06044p pro... 132 4e-31
AE013599-2368|AAF57937.2| 163|Drosophila melanogaster CG6435-PA... 132 4e-31
AY071758-1|AAL49380.1| 159|Drosophila melanogaster RH62928p pro... 130 1e-30
AE013599-2367|AAF57938.2| 159|Drosophila melanogaster CG6429-PA... 130 1e-30
BT022497-1|AAY54913.1| 162|Drosophila melanogaster IP06144p pro... 128 5e-30
BT001833-1|AAN71588.1| 263|Drosophila melanogaster RH48616p pro... 71 2e-12
AE014296-1181|AAF50619.1| 263|Drosophila melanogaster CG14823-P... 71 2e-12
BT022509-1|AAY54925.1| 142|Drosophila melanogaster IP06344p pro... 65 6e-11
AE014134-1544|AAF52696.2| 899|Drosophila melanogaster CG18405-P... 32 0.65
U00690-1|AAA81883.1| 2516|Drosophila melanogaster calcium channe... 29 3.4
AE014134-2676|AAN10931.1| 2300|Drosophila melanogaster CG4894-PD... 29 3.4
AE014134-2675|AAF53504.1| 2516|Drosophila melanogaster CG4894-PA... 29 3.4
AE014134-2674|AAN10930.1| 2552|Drosophila melanogaster CG4894-PC... 29 3.4
AE014134-2673|AAN10929.1| 2519|Drosophila melanogaster CG4894-PB... 29 3.4
BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p pro... 29 4.5
AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-P... 29 4.5
AY094737-1|AAM11090.1| 828|Drosophila melanogaster GH28553p pro... 29 6.0
AE014297-3729|AAF56407.3| 828|Drosophila melanogaster CG11848-P... 29 6.0
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 28 7.9
BT029957-1|ABM92831.1| 1040|Drosophila melanogaster IP17501p pro... 28 7.9
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 28 7.9
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 28 7.9
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 28 7.9
>AY071664-1|AAL49286.1| 161|Drosophila melanogaster RH01665p
protein.
Length = 161
Score = 176 bits (429), Expect = 2e-44
Identities = 70/112 (62%), Positives = 82/112 (73%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQCEGETCGLXRITWGYWADAGKPTINGLLPDAPDAYSSC 323
PVT+VCLGCIC+AI GC Q C G CGL RITW YWAD GK T+ P + DAY++C
Sbjct: 30 PVTDVCLGCICEAISGCNQTRYCGGGVCGLFRITWAYWADGGKLTLGNESPQSEDAYANC 89
Query: 324 TVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNY 479
DPYCA T+QNYM +FGQDCNGD ++CYD+ AIHK GGYGC GEL + Y
Sbjct: 90 VNDPYCAANTIQNYMTKFGQDCNGDNAIDCYDFAAIHKLGGYGCKGELSYQY 141
>AE013599-2365|AAF57940.2| 161|Drosophila melanogaster CG6426-PA
protein.
Length = 161
Score = 176 bits (429), Expect = 2e-44
Identities = 70/112 (62%), Positives = 82/112 (73%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQCEGETCGLXRITWGYWADAGKPTINGLLPDAPDAYSSC 323
PVT+VCLGCIC+AI GC Q C G CGL RITW YWAD GK T+ P + DAY++C
Sbjct: 30 PVTDVCLGCICEAISGCNQTRYCGGGVCGLFRITWAYWADGGKLTLGNESPQSEDAYANC 89
Query: 324 TVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNY 479
DPYCA T+QNYM +FGQDCNGD ++CYD+ AIHK GGYGC GEL + Y
Sbjct: 90 VNDPYCAANTIQNYMTKFGQDCNGDNAIDCYDFAAIHKLGGYGCKGELSYQY 141
>AE013599-2366|AAF57939.1| 161|Drosophila melanogaster CG6421-PA
protein.
Length = 161
Score = 155 bits (376), Expect = 4e-38
Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQC---EGETCGLXRITWGYWADAGKPTINGLLPDAPDAY 314
PVTE+CL CIC+AI GC C E CG+ RITWGYW DAGK T+NG PD+ A+
Sbjct: 30 PVTELCLTCICEAISGCNATAICTSAEKGACGIFRITWGYWVDAGKLTVNGEHPDSEKAF 89
Query: 315 SSCTVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNY 479
+C DP+CA VQNYM++F QDCN DG ++C+DY IHK G YGC ++P+N+
Sbjct: 90 INCAKDPHCAADLVQNYMKKFNQDCNDDGEMDCHDYARIHKLGAYGCQADMPYNF 144
>AL031863-2|CAA21317.1| 161|Drosophila melanogaster EG:EG0003.8
protein.
Length = 161
Score = 155 bits (375), Expect = 5e-38
Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQC---EGETCGLXRITWGYWADAGKPTINGLLPDAPDAY 314
PVTE+CL CIC+AI GC C E CG+ RITWGYW DAGK T+NG PD+ A+
Sbjct: 30 PVTELCLTCICEAISGCNATAICTSAEKGACGIFRITWGYWVDAGKLTVNGEHPDSEKAF 89
Query: 315 SSCTVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNY 479
+C DP+CA VQNYM++F QDCN DG ++C+DY IHK G YGC ++P+N+
Sbjct: 90 INCANDPHCAADLVQNYMKKFNQDCNDDGEMDCHDYARIHKLGAYGCQADMPYNF 144
>AY071760-1|AAL49382.1| 161|Drosophila melanogaster RH65675p
protein.
Length = 161
Score = 153 bits (370), Expect = 2e-37
Identities = 62/115 (53%), Positives = 79/115 (68%), Gaps = 3/115 (2%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQC---EGETCGLXRITWGYWADAGKPTINGLLPDAPDAY 314
PVTE+CL CIC+AI GC C E CG+ RITWGYW DAGK T+NG PD+ +
Sbjct: 30 PVTELCLTCICEAISGCNATAICTSAEKGACGIFRITWGYWVDAGKLTVNGEHPDSEKDF 89
Query: 315 SSCTVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNY 479
+C DP+CA VQNYM++F QDCN DG ++C+DY IHK G YGC ++P+N+
Sbjct: 90 INCAKDPHCAADLVQNYMKKFNQDCNDDGEMDCHDYARIHKLGAYGCQADMPYNF 144
>BT022481-1|AAY54897.1| 163|Drosophila melanogaster IP06044p
protein.
Length = 163
Score = 132 bits (318), Expect = 4e-31
Identities = 54/114 (47%), Positives = 72/114 (63%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQCEGETCGLXRITWGYWADAGKPTINGLLPDAPDAYSSC 323
PVTE CL C+C+ + GC C CG+ RITWGYW +AGK T+ + DA+++C
Sbjct: 24 PVTEDCLDCLCETMSGCNASAICVNGACGIFRITWGYWVEAGKLTLPTDTALSEDAFTNC 83
Query: 324 TVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVK 485
P+CA TVQNYM + GQDCNGD ++C D+ A+HK G C ELP+ + K
Sbjct: 84 VNQPHCAANTVQNYMFKHGQDCNGDEHIDCLDFGALHKLGNLKCQEELPYIFAK 137
>AE013599-2368|AAF57937.2| 163|Drosophila melanogaster CG6435-PA
protein.
Length = 163
Score = 132 bits (318), Expect = 4e-31
Identities = 54/114 (47%), Positives = 72/114 (63%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQCEGETCGLXRITWGYWADAGKPTINGLLPDAPDAYSSC 323
PVTE CL C+C+ + GC C CG+ RITWGYW +AGK T+ + DA+++C
Sbjct: 24 PVTEDCLDCLCETMSGCNASAICVNGACGIFRITWGYWVEAGKLTLPTDTALSEDAFTNC 83
Query: 324 TVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVK 485
P+CA TVQNYM + GQDCNGD ++C D+ A+HK G C ELP+ + K
Sbjct: 84 VNQPHCAANTVQNYMFKHGQDCNGDEHIDCLDFGALHKLGNLKCQEELPYIFAK 137
>AY071758-1|AAL49380.1| 159|Drosophila melanogaster RH62928p
protein.
Length = 159
Score = 130 bits (315), Expect = 1e-30
Identities = 51/112 (45%), Positives = 71/112 (63%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQCEGETCGLXRITWGYWADAGKPTINGLLPDAPDAYSSC 323
P+TE CL C+C+A+ GC C CG+ RITW W D+G+ TI G P ++++C
Sbjct: 27 PITEQCLICMCEALSGCNATAVCVNGACGIFRITWDQWVDSGRLTIPGDSPLTDSSFTNC 86
Query: 324 TVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNY 479
DPYCA T+Q+YM ++GQDCN D +CYDY AIH G + C ++P+ Y
Sbjct: 87 ANDPYCAADTLQSYMVKYGQDCNDDQKEDCYDYGAIHYMGPFNCKADMPYTY 138
>AE013599-2367|AAF57938.2| 159|Drosophila melanogaster CG6429-PA
protein.
Length = 159
Score = 130 bits (315), Expect = 1e-30
Identities = 51/112 (45%), Positives = 71/112 (63%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQCEGETCGLXRITWGYWADAGKPTINGLLPDAPDAYSSC 323
P+TE CL C+C+A+ GC C CG+ RITW W D+G+ TI G P ++++C
Sbjct: 27 PITEQCLICMCEALSGCNATAVCVNGACGIFRITWDQWVDSGRLTIPGDSPLTDSSFTNC 86
Query: 324 TVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNY 479
DPYCA T+Q+YM ++GQDCN D +CYDY AIH G + C ++P+ Y
Sbjct: 87 ANDPYCAADTLQSYMVKYGQDCNDDQKEDCYDYGAIHYMGPFNCKADMPYTY 138
>BT022497-1|AAY54913.1| 162|Drosophila melanogaster IP06144p
protein.
Length = 162
Score = 128 bits (309), Expect = 5e-30
Identities = 54/114 (47%), Positives = 71/114 (62%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQCEGETCGLXRITWGYWADAGKPTINGLLPDAPDAYSSC 323
PVTE CL C+C+ + GC C CG+ RITWGYW +AGK T+ DA+++C
Sbjct: 24 PVTEDCLDCLCETMSGCNASAICVNGACGIFRITWGYWVEAGKLTLPTDTA-LSDAFTNC 82
Query: 324 TVDPYCAGQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVK 485
P+CA TVQNYM + GQDCNGD ++C D+ A+HK G C ELP+ + K
Sbjct: 83 VNQPHCAANTVQNYMFKHGQDCNGDEHIDCLDFGALHKLGNLKCQEELPYIFAK 136
>BT001833-1|AAN71588.1| 263|Drosophila melanogaster RH48616p
protein.
Length = 263
Score = 70.5 bits (165), Expect = 2e-12
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +3
Query: 219 ETCGLXRITWGYWADAGKPTINGLLPDAPDA--YSSCTVDPYCAGQTVQNYMRRFG-QDC 389
E CG+ RI+ YW DA + + PD A Y C VD CA + V++Y++R+G +DC
Sbjct: 162 EPCGIYRISHVYWQDA----LRIIDPDDSLARDYGRCVVDVQCAERIVRSYVQRYGGEDC 217
Query: 390 NGDGVVNCYDYMAIHKKGGYGCTGELP 470
NGDG + C D++ +H +G GC + P
Sbjct: 218 NGDGRIECRDHVRLHMRGPGGCRRQEP 244
>AE014296-1181|AAF50619.1| 263|Drosophila melanogaster CG14823-PA,
isoform A protein.
Length = 263
Score = 70.5 bits (165), Expect = 2e-12
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +3
Query: 219 ETCGLXRITWGYWADAGKPTINGLLPDAPDA--YSSCTVDPYCAGQTVQNYMRRFG-QDC 389
E CG+ RI+ YW DA + + PD A Y C VD CA + V++Y++R+G +DC
Sbjct: 162 EPCGIYRISHVYWQDA----LRIIDPDDSLARDYGRCVVDVQCAERIVRSYVQRYGGEDC 217
Query: 390 NGDGVVNCYDYMAIHKKGGYGCTGELP 470
NGDG + C D++ +H +G GC + P
Sbjct: 218 NGDGRIECRDHVRLHMRGPGGCRRQEP 244
>BT022509-1|AAY54925.1| 142|Drosophila melanogaster IP06344p
protein.
Length = 142
Score = 65.3 bits (152), Expect = 6e-11
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +3
Query: 144 PVTEVCLGCICQAIFGCKQGLQCEGETCGLXRITWGYWADAGKPTI 281
PVTE CL C+C+ + GC C CG+ RITWGYW +AGK T+
Sbjct: 42 PVTEDCLDCLCETMSGCNASAICVNGACGIFRITWGYWVEAGKLTL 87
>AE014134-1544|AAF52696.2| 899|Drosophila melanogaster CG18405-PA,
isoform A protein.
Length = 899
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 168 SRDTPPSQGGVPKHRRNNSGNQQQRTKPDHSRS 70
+R PP G V +HR N+ QQQ+++ HS S
Sbjct: 832 ARRQPPRHGIVTQHRSNSPQQQQQQSQQPHSSS 864
>U00690-1|AAA81883.1| 2516|Drosophila melanogaster calcium channel
alpha-1 subunit protein.
Length = 2516
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -2
Query: 202 PCLHPKIAWQMQPRHTSVTGGSSETS 125
P L P+ AWQ+QP+++ + GS+ +S
Sbjct: 217 PRLTPEEAWQLQPQNSVTSAGSTNSS 242
>AE014134-2676|AAN10931.1| 2300|Drosophila melanogaster CG4894-PD,
isoform D protein.
Length = 2300
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -2
Query: 202 PCLHPKIAWQMQPRHTSVTGGSSETS 125
P L P+ AWQ+QP+++ + GS+ +S
Sbjct: 217 PRLTPEEAWQLQPQNSVTSAGSTNSS 242
>AE014134-2675|AAF53504.1| 2516|Drosophila melanogaster CG4894-PA,
isoform A protein.
Length = 2516
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -2
Query: 202 PCLHPKIAWQMQPRHTSVTGGSSETS 125
P L P+ AWQ+QP+++ + GS+ +S
Sbjct: 217 PRLTPEEAWQLQPQNSVTSAGSTNSS 242
>AE014134-2674|AAN10930.1| 2552|Drosophila melanogaster CG4894-PC,
isoform C protein.
Length = 2552
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -2
Query: 202 PCLHPKIAWQMQPRHTSVTGGSSETS 125
P L P+ AWQ+QP+++ + GS+ +S
Sbjct: 217 PRLTPEEAWQLQPQNSVTSAGSTNSS 242
>AE014134-2673|AAN10929.1| 2519|Drosophila melanogaster CG4894-PB,
isoform B protein.
Length = 2519
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -2
Query: 202 PCLHPKIAWQMQPRHTSVTGGSSETS 125
P L P+ AWQ+QP+++ + GS+ +S
Sbjct: 217 PRLTPEEAWQLQPQNSVTSAGSTNSS 242
>BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p
protein.
Length = 1102
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 129 HRRNNSGNQQQRTKPDHSRSHCVENTQTKKI 37
H+ NN +QQQ+ +P HS + V TK +
Sbjct: 178 HQHNNQQHQQQQRRPHHSSLYGVGRKPTKHL 208
>AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-PA
protein.
Length = 1102
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 129 HRRNNSGNQQQRTKPDHSRSHCVENTQTKKI 37
H+ NN +QQQ+ +P HS + V TK +
Sbjct: 178 HQHNNQQHQQQQRRPHHSSLYGVGRKPTKHL 208
>AY094737-1|AAM11090.1| 828|Drosophila melanogaster GH28553p
protein.
Length = 828
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 273 PTINGLLPDAPDAYSSCTVDPYCAGQT-VQNYMRRFGQDCNGDGVVNC 413
P + G + D PDA+ +C + P G + + N GVV C
Sbjct: 219 PQLQGTVADPPDAFDNCAIFPSAGGSSNGSGRVAATQTHQNPSGVVTC 266
>AE014297-3729|AAF56407.3| 828|Drosophila melanogaster CG11848-PA
protein.
Length = 828
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 273 PTINGLLPDAPDAYSSCTVDPYCAGQT-VQNYMRRFGQDCNGDGVVNC 413
P + G + D PDA+ +C + P G + + N GVV C
Sbjct: 219 PQLQGTVADPPDAFDNCAIFPSAGGSSNGSGRVAATQTHQNPSGVVTC 266
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 549 SIRQSYLRWVLRKNIDALVK 490
S+++ Y +W+L KN DAL K
Sbjct: 767 SLQKQYYKWILTKNFDALRK 786
>BT029957-1|ABM92831.1| 1040|Drosophila melanogaster IP17501p
protein.
Length = 1040
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 156 PPSQGGVPKHRRNNSGNQQQRTKPDHSRS 70
PP Q G H +N N+QQ+ H S
Sbjct: 113 PPHQSGSNSHSHHNGSNRQQQQHQQHPHS 141
>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p
protein.
Length = 1645
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 549 SIRQSYLRWVLRKNIDALVK 490
S+++ Y +W+L KN DAL K
Sbjct: 767 SLQKQYYKWILTKNFDALRK 786
>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
protein.
Length = 1101
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 549 SIRQSYLRWVLRKNIDALVK 490
S+++ Y +W+L KN DAL K
Sbjct: 235 SLQKQYYKWILTKNFDALRK 254
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 549 SIRQSYLRWVLRKNIDALVK 490
S+++ Y +W+L KN DAL K
Sbjct: 767 SLQKQYYKWILTKNFDALRK 786
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,550,860
Number of Sequences: 53049
Number of extensions: 628404
Number of successful extensions: 1946
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1937
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -