Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4993
(578 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 25 0.71
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 24 0.94
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.2
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 23 2.9
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 6.7
X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein. 21 8.8
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 8.8
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 8.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 8.8
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 8.8
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 8.8
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 24.6 bits (51), Expect = 0.71
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 524 GYCAKTLMHWLNTFYIV 474
GY A + W+N +YIV
Sbjct: 63 GYAAAVMSCWMNVYYIV 79
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 24.2 bits (50), Expect = 0.94
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 282 NGLLPDAPDAYSSCTVDP--YCAGQTVQNYMRRF 377
N L+P A +YS+ DP Y Q + +Y R+
Sbjct: 401 NNLIPSALQSYSTSMRDPAFYMLYQNILSYFLRY 434
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.8 bits (49), Expect = 1.2
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 282 NGLLPDAPDAYSSCTVDP--YCAGQTVQNYMRRF 377
N L+P A +YS+ DP Y Q + +Y R+
Sbjct: 401 NNLIPSALQSYSTSMRDPAFYMLYQKILSYFLRY 434
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 201 LACIQR*PGKCSRD 160
LACI PG+C R+
Sbjct: 172 LACISSRPGQCGRE 185
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/35 (25%), Positives = 13/35 (37%)
Frame = -3
Query: 153 PSQGGVPKHRRNNSGNQQQRTKPDHSRSHCVENTQ 49
P +G P H+ N P H H ++ Q
Sbjct: 328 PHRGSSPHHQHGNHTMGPTMGPPHHHHHHQTQSLQ 362
>X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein.
Length = 103
Score = 21.0 bits (42), Expect = 8.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 147 QGGVPKHRRNNSGNQQQRTKP 85
+GG +HR+ N Q TKP
Sbjct: 13 KGGAKRHRKVLGDNIQGITKP 33
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.0 bits (42), Expect = 8.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 170 AAETHLRHRGEFRNIGETTPATNS 99
AAE LR+ +FRN E A N+
Sbjct: 89 AAELALRNIVQFRNTPEVHQAINT 112
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 156 VCLGCICQAIFG 191
VCLG +CQ G
Sbjct: 8 VCLGIVCQGTTG 19
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -1
Query: 524 GYCAKTLMHWLNTFYIV 474
GY L W N +YI+
Sbjct: 101 GYATCVLSCWTNIYYII 117
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -1
Query: 524 GYCAKTLMHWLNTFYIV 474
GY L W N +YI+
Sbjct: 154 GYATCVLSCWTNIYYII 170
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 8.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 494 TSASMFLRSTHLK*LCLIEKP 556
T F+ THLK L + EKP
Sbjct: 403 TKPEGFMIPTHLKVLTIEEKP 423
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 156 VCLGCICQAIFG 191
VCLG +CQ G
Sbjct: 8 VCLGIVCQGTTG 19
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 156 VCLGCICQAIFG 191
VCLG +CQ G
Sbjct: 8 VCLGIVCQGTTG 19
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,733
Number of Sequences: 438
Number of extensions: 3513
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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