Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4990
(745 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 27 0.25
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 27 0.25
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 27 0.25
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 27 0.25
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 26 0.43
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 26 0.43
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.75
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 3.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 3.0
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 4.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 4.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 4.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 5.3
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 5.3
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.25
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTNAKFYNVIDFCKGLEI 305
+ +++KY Y NN+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.25
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTNAKFYNVIDFCKGLEI 305
+ +++KY Y NN+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.25
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTNAKFYNVIDFCKGLEI 305
+ +++KY Y NN+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.25
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTNAKFYNVIDFCKGLEI 305
+ +++KY Y NN+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 25.8 bits (54), Expect = 0.43
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -3
Query: 743 PPPGILLPLRWRFSIFRPTAAMLSLASSSFKRNSNCSKPVAH 618
PP + +PL ++ +F LS+ + N N PV H
Sbjct: 290 PPTSLTVPLLGKYLLFTMVLVTLSVVVTIAVLNVNFRSPVTH 331
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.8 bits (54), Expect = 0.43
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -2
Query: 306 QFQDLCKNLLHCRILRSCHCSRICT*NCAC 217
+++ C L HC +C C C C C
Sbjct: 738 RYEAHCFALCHCCDFDACDCEMTCPAGCKC 767
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTNAKFYN 275
N +++KY Y NN+ N YN
Sbjct: 325 NNNNYKYNYNNNNYNNNNYN 344
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 2.3
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 345 QVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHL 497
Q YH+ + F KQK ++ L + L LM F NKS ++ +
Sbjct: 9 QHYHITPV-FTKQKKVKEDTELNLQTIFNEDKLDNLMDKQFKNKSLPVIEI 58
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +3
Query: 135 FDPDDYKKYHINAQQWSHIVKWDSFKCNTHSFKYRYVNNDTN 260
FD D Y+ N Q H K D+ N H+ + + + N
Sbjct: 417 FDNQDNNHYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNN 458
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTNAKFYN 275
+ +++KY Y NN+ N YN
Sbjct: 90 HNNNYKYNYNNNNYNNNNYN 109
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTNAKFYN 275
+ +++KY Y NN+ N YN
Sbjct: 90 HNNNYKYNYNNNNYNNNNYN 109
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 201 DSFKCNTHSFKYRYVNNDTNAKFY 272
+++K N ++ KY Y NN+ N K Y
Sbjct: 94 NNYKYNYNN-KYNYNNNNYNKKLY 116
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = -3
Query: 743 PPPGILLPLRWRFSIFRPTAAMLSLASSSFKRNSNCSKPVAHIV 612
PP +++PL +F +F S+ + N + P H++
Sbjct: 294 PPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHVM 337
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTN---AKFYNVIDFCKGLEI 305
N +++KY Y NN+ N K Y I++ + + I
Sbjct: 92 NNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPI 124
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTN---AKFYNVIDFCKGLEI 305
N +++KY Y NN+ N K Y I++ + + I
Sbjct: 92 NNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPI 124
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTN---AKFYNVIDFCKGLEI 305
N +++KY Y NN+ N K Y I++ + + I
Sbjct: 92 NNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPI 124
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = -3
Query: 743 PPPGILLPLRWRFSIFRPTAAMLSLASSSFKRNSNCSKPVAH 618
PP +++PL ++ IF +S+ + N + P H
Sbjct: 298 PPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTH 339
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = -3
Query: 743 PPPGILLPLRWRFSIFRPTAAMLSLASSSFKRNSNCSKPVAH 618
PP +++PL ++ IF +S+ + N + P H
Sbjct: 298 PPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTH 339
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 216 NTHSFKYRYVNNDTN---AKFYNVIDFCKGLEI 305
N +++KY Y NN+ N K Y I++ + + +
Sbjct: 92 NNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPV 124
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 5.3
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -3
Query: 401 EIAFGFLLVKNNFV*MVNLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVIV 246
+I F L + VNLI ++I Y+ V F A + C+ +++
Sbjct: 224 DIFFNITLRRKTLFYTVNLIVPCVSISYLSVLAFYLPADSGEKIALCINILL 275
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,959
Number of Sequences: 438
Number of extensions: 3836
Number of successful extensions: 28
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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