Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4989
         (367 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64837-3|AAB04837.1|  782|Caenorhabditis elegans Hypothetical pr...    31   0.25 
U80842-12|AAB37942.1|  139|Caenorhabditis elegans Hypothetical p...    28   2.4  
Z81147-9|CAB03538.1|  349|Caenorhabditis elegans Hypothetical pr...    27   5.4  
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    26   7.2  
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    26   7.2  
AF016681-7|AAB66176.1|  139|Caenorhabditis elegans Hypothetical ...    26   7.2  
U42848-3|AAA83609.1|  693|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>U64837-3|AAB04837.1|  782|Caenorhabditis elegans Hypothetical
           protein T27E4.6 protein.
          Length = 782

 Score = 31.1 bits (67), Expect = 0.25
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 311 HLHQTKPGEFVLHKPWHAPSPWSDLLVYPCIL 216
           H+H  K  E +L KPW+  +P+   ++  CIL
Sbjct: 531 HVHDDKLVEIILSKPWNQMAPYMMGMIAGCIL 562


>U80842-12|AAB37942.1|  139|Caenorhabditis elegans Hypothetical
           protein ZC239.3 protein.
          Length = 139

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 113 MKMLLEHTRWYGLREICSEC 54
           +KMLL+   +Y L E+C +C
Sbjct: 77  LKMLLDEAEYYELTELCDDC 96


>Z81147-9|CAB03538.1|  349|Caenorhabditis elegans Hypothetical
           protein T09E11.11 protein.
          Length = 349

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 110 SCYYTGAIASRLRRAQGEFIVRAGQREVLKLHVT 211
           +C  TGA+ +     Q   I+R  QR+ + ++VT
Sbjct: 63  TCLETGALFNNFSSLQAHMIIRFSQRKQILVYVT 96


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 100 NSIFMLLHWRDRFASAKGAG*VHRPSWTARG 192
           NS+  + H  D +++++    VH+  WT RG
Sbjct: 3   NSLMQMRHAADSWSTSEVRSLVHKHMWTIRG 33


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 100 NSIFMLLHWRDRFASAKGAG*VHRPSWTARG 192
           NS+  + H  D +++++    VH+  WT RG
Sbjct: 3   NSLMQMRHAADSWSTSEVRSLVHKHMWTIRG 33


>AF016681-7|AAB66176.1|  139|Caenorhabditis elegans Hypothetical
           protein F22E5.12 protein.
          Length = 139

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 113 MKMLLEHTRWYGLREICSEC 54
           +KMLL    +Y L E+C +C
Sbjct: 77  LKMLLGEAEYYELTELCDDC 96


>U42848-3|AAA83609.1|  693|Caenorhabditis elegans Hypothetical
           protein C31H1.1 protein.
          Length = 693

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 66  NLTKTVPSGVF*QHLHATTLARSLRVCEGRRVSSSSELDS 185
           +L    PS      L  TT  R +R+C G+++    ELD+
Sbjct: 197 SLASLAPSSQILSSLVETTENREMRLCLGKQMEGILELDT 236


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,028,372
Number of Sequences: 27780
Number of extensions: 177485
Number of successful extensions: 482
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)