Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4987
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   2.9  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   3.8  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   8.9  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   8.9  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   8.9  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   8.9  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   8.9  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   8.9  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   8.9  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = +2

Query: 47  SHS-IYCKKY*KNNQRF 94
           SH+ IYC+KY KN + +
Sbjct: 157 SHNDIYCEKYEKNGETY 173


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           KS +   SRE K+  + +  + +V+ + LRE
Sbjct: 2   KSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 32


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 2   RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 32


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 2   RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 32


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 2   RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 32


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 2   RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 32


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 2   RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 32


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 2   RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 32


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 519 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 427
           +S +   SRE K+  + +  + +V+ + LRE
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,269
Number of Sequences: 438
Number of extensions: 2848
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)