Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4985
         (416 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0226 + 2842897-2842921,2843049-2843155,2843426-2843494,285...    27   4.6  
04_01_0502 - 6587068-6587964                                           27   8.0  

>04_01_0226 +
           2842897-2842921,2843049-2843155,2843426-2843494,
           2850676-2852745
          Length = 756

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 196 IKLIITII-CCYRLIAHITVRRNAREDRVTRAFSCAIGD*NFIEK 65
           + LI  +I  CY +  HI VRR A   RV      A+G   + E+
Sbjct: 152 LNLIFQVIGACYVVYKHIIVRREATILRVATGLISAVGVVKYCER 196


>04_01_0502 - 6587068-6587964
          Length = 298

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 380 AYCHHSTVVPTHCFKRSVNARIIENTGLDHGQEVPI 273
           AY  +  V PT+ F +  N  IIE  G+   Q+VP+
Sbjct: 177 AYLSNKAVTPTNKFFKHPNGNIIEGFGI--VQDVPV 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,266,121
Number of Sequences: 37544
Number of extensions: 172909
Number of successful extensions: 381
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)