Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4980
(770 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 65 7e-11
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 62 6e-10
03_06_0479 + 34217170-34217172,34217337-34217786 60 2e-09
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 59 3e-09
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 58 6e-09
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 58 1e-08
05_01_0103 + 686770-687017,687120-687270 54 1e-07
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 54 2e-07
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 48 8e-06
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 35 0.083
02_03_0407 - 18675368-18675378,18676047-18676977,18677323-186773... 30 1.8
01_05_0597 - 23526705-23526749,23526794-23526905,23527068-235271... 29 3.1
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 29 4.1
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 28 7.2
01_01_0206 - 1770622-1771347 28 7.2
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 28 9.5
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 64.9 bits (151), Expect = 7e-11
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +3
Query: 84 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 260
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 261 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLM 356
+CRY ++DF++ T E +K K+F +
Sbjct: 69 -SDCRYAIYDFDFV-----TEENCQKSKIFFV 94
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 61.7 bits (143), Expect = 6e-10
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 84 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 260
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G+R YE F L +
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE-- 81
Query: 261 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMFVVP 368
G+CR+ ++DF++ T+E K ++F + P
Sbjct: 82 -GDCRFAIYDFDFL-----TAEDVPKSRIFYILWSP 111
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 361 WCPDTAKVKKKMLYSSSFDALKKSL 435
W PD AKV+ KMLY+SS + KK L
Sbjct: 109 WSPDNAKVRSKMLYASSNERFKKEL 133
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 425 KSPLSGVQKYIQATDLSEASQEAVEEKLR 511
K L+G+Q +QATD E S +A++++++
Sbjct: 130 KKELNGIQLEVQATDAGEISLDALKDRVK 158
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 87 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGT 263
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +++ L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 264 GECRYGLFDFEYT 302
CRY ++D ++T
Sbjct: 65 --CRYAVYDHDFT 75
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 358 SWCPDTAKVKKKMLYSSSFDALKKSL 435
SW P A V+ KM+Y+SS + KK L
Sbjct: 100 SWSPAAADVRSKMVYASSNEGFKKEL 125
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +3
Query: 57 FLRE*HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQ 233
F+R H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G Y+
Sbjct: 3 FMRS-HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDD 61
Query: 234 FLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLM 356
FL L + +CRY L+DF++ T E +K K+F +
Sbjct: 62 FLASLPEN---DCRYALYDFDFV-----TGENVQKSKIFFI 94
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 358 SWCPDTAKVKKKMLYSSSFDALKKSL 435
+W P T++++ KMLYS+S D +K+ L
Sbjct: 95 AWSPSTSRIRAKMLYSTSKDRIKQEL 120
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 58.4 bits (135), Expect = 6e-09
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +3
Query: 84 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 260
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G+ Y+ F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 261 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMFVVP 368
ECRY +FDF++ T E +K K+F + P
Sbjct: 81 ADECRYAVFDFDFV-----TDENCQKSKIFFISWAP 111
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 358 SWCPDTAKVKKKMLYSSSFDALKKSL 435
SW PDT++V+ KMLY+SS D K+ L
Sbjct: 108 SWAPDTSRVRSKMLYASSKDRFKREL 133
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +3
Query: 84 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 260
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G+ Y+ F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 261 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLM 356
ECRY +FDF++ T E +K K+F +
Sbjct: 326 ASECRYAVFDFDFV-----TDENCQKSKIFFI 352
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 358 SWCPDTAKVKKKMLYSSSFDALKKSL 435
SW PDT+KV+ KMLY+SS D K+ L
Sbjct: 353 SWSPDTSKVRSKMLYASSKDRFKREL 378
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +3
Query: 93 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 269
+ V D CK + E+K + +R++++ I ++K+ + VE VGE Y+ F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 270 CRYGLFDFEYTHQCQGTSEASKKQKLFLM 356
CRY +FD+++ T E +K K+F +
Sbjct: 58 CRYAIFDYDFV-----TEENCQKSKIFFI 81
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 358 SWCPDTAKVKKKMLYSSSFDALKKSL 435
+W PDT++V+ KM+Y+SS D K+ L
Sbjct: 82 AWSPDTSRVRSKMIYASSKDRFKREL 107
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +3
Query: 90 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTG 266
G+ V+D CK ++E+K + R++VF I D+ +I VE +G+ YE F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 267 ECRYGLFDFEYTHQCQGTSEASKKQKLF 350
ECRY ++D ++ T E +K K+F
Sbjct: 70 ECRYAVYDLDFV-----TDENCQKSKIF 92
Score = 36.3 bits (80), Expect = 0.027
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 358 SWCPDTAKVKKKMLYSSSFDALKKSL 435
SW PDTA+ + KMLY+SS D ++ L
Sbjct: 95 SWSPDTARTRSKMLYASSKDRFRREL 120
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 93 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTGE 269
+ V + K+ + E+K+ K HRYV+F I D + +I VE G Y+ F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 270 CRYGLFDFEYTHQCQGTSEASKKQKLFLM 356
CRY ++D ++ + + +K K+F +
Sbjct: 77 CRYAVYDLDFV-----SDDNCRKSKIFFI 100
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 34.7 bits (76), Expect = 0.083
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 93 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDL 248
+ V + K+ + E+ + K HRYV+F I D + +I VE G Y+ F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>02_03_0407 -
18675368-18675378,18676047-18676977,18677323-18677376,
18677809-18678039,18678112-18678319,18678405-18678433,
18678638-18678706,18678832-18678893,18679056-18679133,
18679243-18679315,18681135-18681260
Length = 623
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +1
Query: 403 SSSFDALKKSLVRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHS 582
SSS D LKK L R S P P+ + SGG+ HR Y A +P +RH+
Sbjct: 420 SSSTDDLKK-LKRESWSGPI--PIKAGSGGKPFSQADHRPSPTMAYPGAMPAAKPHVRHA 476
Query: 583 CPDDTRPR 606
P+
Sbjct: 477 SSSSVSPK 484
>01_05_0597 -
23526705-23526749,23526794-23526905,23527068-23527134,
23527439-23527566,23527638-23527750,23527827-23527972,
23528419-23528525,23528667-23528873,23530878-23531129,
23531324-23531406
Length = 419
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 364 CPDTAKVKKKMLYSSSFDALKKSLVRSSEVHPSDRPLGSVSGGR 495
CPD ++ ++ Y D + +++V ++ P DR SGG+
Sbjct: 173 CPDVSRQSRECFYIVFEDEIHQTIVENNLFKPGDRVAIGASGGK 216
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 156 NDASCPS*SPRKWSCKRPKLSHQTPFFDVIHVKITPLTSPTPRQRQPE 13
++ S P +P K +PKL ++P + + + P TSPT Q P+
Sbjct: 161 SEDSTPKETPPKAEETKPKLEEKSPKAEPPKMPLPPKTSPTEPQLPPK 208
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 120 TYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTG 266
T +++ +D+ + ++ EK D E + E NA YE+ + L+ G G
Sbjct: 140 TKQKVAEDENRNLIDRWML-EKMKDAERLNEANAMYEEMVLKLKSAGVG 187
>01_01_0206 - 1770622-1771347
Length = 241
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 766 PPFKPKTHYCSRQK*ARGGGTYPRGLTRGP 677
PP PK C +Q+ GGG P R P
Sbjct: 81 PPVHPKPSPCKQQQATSGGGVKPTSYQRRP 110
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 439 RSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 537
R E P R G+ +GGRRR+A +R + I
Sbjct: 11 RGGESPPPPRTRGASAGGRRRKAEAYREVLRRI 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,924,769
Number of Sequences: 37544
Number of extensions: 406448
Number of successful extensions: 1428
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -