Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4977
         (735 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010150-1|AAH10150.1|  187|Homo sapiens mitochondrial ribosomal...    97   4e-20
AK223069-1|BAD96789.1|  187|Homo sapiens mitochondrial ribosomal...    97   4e-20
EF152584-1|ABO34073.1|  278|Homo sapiens PC1/MRPS28 fusion prote...    89   2e-17
Z26652-1|CAA81393.1|  993|Homo sapiens FLT3 receptor tyrosine ki...    31   5.7  
U02687-1|AAA18947.1|  993|Homo sapiens serine/threonine protein ...    31   5.7  
BC126350-1|AAI26351.1|  993|Homo sapiens fms-related tyrosine ki...    31   5.7  
BC036028-1|AAH36028.1|  596|Homo sapiens FLT3 protein protein.         31   5.7  
AL591024-3|CAH70634.1|  996|Homo sapiens fms-related tyrosine ki...    31   5.7  
AL445262-1|CAI17231.1|  996|Homo sapiens fms-related tyrosine ki...    31   5.7  
AL356915-1|CAI12447.1|  996|Homo sapiens fms-related tyrosine ki...    31   5.7  

>BC010150-1|AAH10150.1|  187|Homo sapiens mitochondrial ribosomal
           protein S28 protein.
          Length = 187

 Score = 97.5 bits (232), Expect = 4e-20
 Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
 Frame = +3

Query: 255 SDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEE------EKSYTFASLLRNSKLMDLG 416
           S+SG+   K+  + +  GFA A E+ S++L+  E       +   +FAS+LR+S L  +G
Sbjct: 35  SESGSSNAKE-PKTRAGGFASALERHSELLQKVEPLQKGSPKNVESFASMLRHSPLTQMG 93

Query: 417 DPVGKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGEEYVRGT 551
               K VIG+IFH+VE+DLYIDFG KFHCVC RP + GE+Y +GT
Sbjct: 94  PAKDKLVIGRIFHIVENDLYIDFGGKFHCVCRRPEVDGEKYQKGT 138


>AK223069-1|BAD96789.1|  187|Homo sapiens mitochondrial ribosomal
           protein S28 variant protein.
          Length = 187

 Score = 97.5 bits (232), Expect = 4e-20
 Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
 Frame = +3

Query: 255 SDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEE------EKSYTFASLLRNSKLMDLG 416
           S+SG+   K+  + +  GFA A E+ S++L+  E       +   +FAS+LR+S L  +G
Sbjct: 35  SESGSSNAKE-PKTRAGGFASALERHSELLQKVEPLQKGSPKNVESFASMLRHSPLTQMG 93

Query: 417 DPVGKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGEEYVRGT 551
               K VIG+IFH+VE+DLYIDFG KFHCVC RP + GE+Y +GT
Sbjct: 94  PAKDKLVIGRIFHIVENDLYIDFGGKFHCVCRRPGVDGEKYQKGT 138


>EF152584-1|ABO34073.1|  278|Homo sapiens PC1/MRPS28 fusion protein
           protein.
          Length = 278

 Score = 89.0 bits (211), Expect = 2e-17
 Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
 Frame = +3

Query: 252 YSDSGNEIDKDISQEKLSGFAKAFEKQSQILE-NPEEEKSYTFASLLRNSKLMDLGDPVG 428
           +S  G+ I K +   K S   K+FE++ + L+ +P+  +S  FAS+LR+S L  +G    
Sbjct: 154 FSSVGSVITKKLEDVKNSPTFKSFEEKVENLKGSPKNVES--FASMLRHSPLTQMGPAKD 211

Query: 429 KTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGE 533
           K VIG+IFH+VE+DLYIDFG KFHCVC RP + GE
Sbjct: 212 KLVIGRIFHIVENDLYIDFGGKFHCVCRRPEVDGE 246


>Z26652-1|CAA81393.1|  993|Homo sapiens FLT3 receptor tyrosine
           kinase precursor protein.
          Length = 993

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 393 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 241
           +E    +Y  F+  ++  + I+F   +RN L++  + PY  + +NQ+   C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184


>U02687-1|AAA18947.1|  993|Homo sapiens serine/threonine protein
           kinase protein.
          Length = 993

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 393 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 241
           +E    +Y  F+  ++  + I+F   +RN L++  + PY  + +NQ+   C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184


>BC126350-1|AAI26351.1|  993|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 993

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 393 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 241
           +E    +Y  F+  ++  + I+F   +RN L++  + PY  + +NQ+   C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184


>BC036028-1|AAH36028.1|  596|Homo sapiens FLT3 protein protein.
          Length = 596

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 393 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 241
           +E    +Y  F+  ++  + I+F   +RN L++  + PY  + +NQ+   C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184


>AL591024-3|CAH70634.1|  996|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 996

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 393 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 241
           +E    +Y  F+  ++  + I+F   +RN L++  + PY  + +NQ+   C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184


>AL445262-1|CAI17231.1|  996|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 996

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 393 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 241
           +E    +Y  F+  ++  + I+F   +RN L++  + PY  + +NQ+   C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184


>AL356915-1|CAI12447.1|  996|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 996

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 393 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 241
           +E    +Y  F+  ++  + I+F   +RN L++  + PY  + +NQ+   C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,713,869
Number of Sequences: 237096
Number of extensions: 1995138
Number of successful extensions: 3234
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3234
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)