Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4976
(397 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF136170-1|AAP97260.1| 63|Homo sapiens cytochrome c oxidase VI... 59 6e-09
X16560-1|CAA34559.1| 63|Homo sapiens protein ( Human COX VIIc ... 54 2e-07
BT007098-1|AAP35762.1| 63|Homo sapiens cytochrome c oxidase su... 54 2e-07
BC007498-1|AAH07498.1| 63|Homo sapiens cytochrome c oxidase su... 54 2e-07
BC001005-1|AAH01005.1| 63|Homo sapiens cytochrome c oxidase su... 54 2e-07
AF067639-1|AAC73062.1| 63|Homo sapiens cytochrome c oxidase su... 54 2e-07
DQ144542-1|AAZ76016.1| 411|Homo sapiens NIAM protein. 29 5.6
BC002810-1|AAH02810.1| 554|Homo sapiens zinc finger protein 205... 28 9.7
AF060865-1|AAC70007.1| 504|Homo sapiens zinc finger protein ZNF... 28 9.7
>AF136170-1|AAP97260.1| 63|Homo sapiens cytochrome c oxidase VIIc
protein.
Length = 63
Score = 58.8 bits (136), Expect = 6e-09
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 232
R T+ VR +H G PG+NLPF + N+++L +Y GSG +AP+ I RHQLLKK
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWRLLAMMTVYFGSGFAAPFFIVRHQLLKK 63
>X16560-1|CAA34559.1| 63|Homo sapiens protein ( Human COX VIIc
gene for subunit VIIc of cytochrome c oxidase (EC
1.9.3.1). ).
Length = 63
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 62 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 229
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RHQLLK
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62
>BT007098-1|AAP35762.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc protein.
Length = 63
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 62 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 229
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RHQLLK
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62
>BC007498-1|AAH07498.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc protein.
Length = 63
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 62 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 229
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RHQLLK
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62
>BC001005-1|AAH01005.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc protein.
Length = 63
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 62 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 229
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RHQLLK
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62
>AF067639-1|AAC73062.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc precursor protein.
Length = 63
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 62 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 229
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RHQLLK
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62
>DQ144542-1|AAZ76016.1| 411|Homo sapiens NIAM protein.
Length = 411
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = +2
Query: 311 E*NKLYVIEK--KKKKTRGGARYPIRPI 388
E NKL V++K KKKK GGAR ++PI
Sbjct: 146 ENNKLEVLKKTCKKKKMAGGARKLVQPI 173
>BC002810-1|AAH02810.1| 554|Homo sapiens zinc finger protein 205
protein.
Length = 554
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 149 CNGCECRRVDSRQEYRR*NGFSRNSLPHFCPICLRC 42
C+ C +R R + G + PH CPIC +C
Sbjct: 394 CDRC-AKRFTRRSDLVTHQGTHTGAKPHKCPICAKC 428
>AF060865-1|AAC70007.1| 504|Homo sapiens zinc finger protein ZNF210
protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 149 CNGCECRRVDSRQEYRR*NGFSRNSLPHFCPICLRC 42
C+ C +R R + G + PH CPIC +C
Sbjct: 344 CDRC-AKRFTRRSDLVTHQGTHTGAKPHKCPICAKC 378
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,126,031
Number of Sequences: 237096
Number of extensions: 1095465
Number of successful extensions: 1978
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1978
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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