Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4956
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81120-3|CAB03345.2| 135|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 31 1.0
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 30 1.4
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical ... 29 4.2
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 9.7
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 9.7
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 27 9.7
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 9.7
>Z81120-3|CAB03345.2| 135|Caenorhabditis elegans Hypothetical
protein T12D8.5 protein.
Length = 135
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 457 CRGRVSWRYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQ 633
CR + K++ + K + + L HN H +AP+ PE +E P+R+ ++
Sbjct: 49 CRIESETQSNKERVELLKQEIDRAEQLLAEHNKHVDAPEIAPETYMEAGQVPPMRKASR 107
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 193 ICQLDEYCSPETNRC 237
IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 193 ICQLDEYCSPETNRC 237
IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 529 PNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQS 675
P+ L HH+ H +P P + P P RT P +K SQS
Sbjct: 314 PSSLQHHHHHRRSP---PLFHSPVYKPKPRSRTESPAALKAAAAAASQS 359
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 169 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 306
D C ++ C+ +E+ TN C P VVC+ +D G K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 169 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 306
D C ++ C+ +E+ TN C P VVC+ +D G K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 478 RYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDP 615
++L + +KN K+ D P+ + P PKP + + +P+P
Sbjct: 207 KFLSSQSNGSKNAKKRRQADSDDDTPNVQIPFPKPSVFCPLLSPEP 252
>AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical
protein ZK616.8 protein.
Length = 360
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 561 RSAETETRTQARNTKPGSPKTNEPTSQREGLRDQN 665
+ ++++T + +NT+ G P P+S +G D+N
Sbjct: 176 KKSDSDTESSHKNTRRGKPVPAPPSSNSKGSNDKN 210
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical protein
F57C7.1a protein.
Length = 1209
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 553 PHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKD 651
P +A KP+P K + P P ++ PL++ D
Sbjct: 1086 PKPQAKKPEPPQKKVAKKPAPQQKKKAPLSILD 1118
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 576 ETRTQARNTKPGSPKTNEPTSQREGLR 656
E TQ R PG+P N TSQ + R
Sbjct: 63 EAGTQGRQYPPGAPHLNRRTSQNQAAR 89
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 499 QPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLN 642
+PA +R + YP P AP P + + NP P +T P N
Sbjct: 166 EPASSR-RPYP---PQQPPSTSAPHSSPNNRTSLYNPQPPPKTGYPTN 209
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 178 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 279
R G++ L C +NRC+P N +C T Y
Sbjct: 1066 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1098
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 178 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 279
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 178 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 279
R G++ L C +NRC+P N +C T Y
Sbjct: 1066 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1098
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 178 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 279
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 576 ETRTQARNTKPGSPKTNEPTSQREGLR 656
E TQ R PG+P N TSQ + R
Sbjct: 63 EAGTQGRQYPPGAPHLNRRTSQNQAAR 89
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 178 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 279
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,970,035
Number of Sequences: 27780
Number of extensions: 334992
Number of successful extensions: 1061
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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