Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4951
         (323 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.              31   0.80 
BC108322-1|AAI08323.1|  556|Homo sapiens ATP10B protein protein.       29   3.2  
AB018258-1|BAA34435.2| 1498|Homo sapiens KIAA0715 protein protein.     28   5.6  
D28476-1|BAA05837.2| 2005|Homo sapiens KIAA0045 protein.               27   9.8  
BC114556-1|AAI14557.1| 2040|Homo sapiens TRIP12 protein protein.       27   9.8  
BC113891-1|AAI13892.1| 1722|Homo sapiens TRIP12 protein protein.       27   9.8  
AC093384-2|AAY14681.1| 1299|Homo sapiens unknown protein.              27   9.8  

>AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.
          Length = 353

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 263 EKKKKNSRGGPVPNS 307
           +KKKKNSRGGPVP +
Sbjct: 46  KKKKKNSRGGPVPGN 60


>BC108322-1|AAI08323.1|  556|Homo sapiens ATP10B protein protein.
          Length = 556

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = -3

Query: 201 GATGAASELERAL---VAAARDQARDLAPLADEAKRLASDLAHIGKSTDRTDTLY-INKP 34
           GATG    L+  +   +A  R+    L  L  + +  A ++AH  +  ++TDT+Y IN  
Sbjct: 493 GATGIEDRLQEGVPDTIATLREAGIQLWVLTGDKQETAVNIAHSCRLLNQTDTVYTINTE 552

Query: 33  TEI 25
            ++
Sbjct: 553 NQV 555


>AB018258-1|BAA34435.2| 1498|Homo sapiens KIAA0715 protein protein.
          Length = 1498

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = -3

Query: 201  GATGAASELERAL---VAAARDQARDLAPLADEAKRLASDLAHIGKSTDRTDTLY 46
            GATG    L+  +   +A  R+    L  L  + +  A ++AH  +  ++TDT+Y
Sbjct: 922  GATGIEDRLQEGVPDTIATLREAGIQLWVLTGDKQETAVNIAHSCRLLNQTDTVY 976


>D28476-1|BAA05837.2| 2005|Homo sapiens KIAA0045 protein.
          Length = 2005

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
 Frame = -3

Query: 243  GGISSSAALESA-CTGATGAASELERALVAAARDQARDLAP---LADEAKR 103
            G + S+ ++ S   T AT AA++L    +  +RD + DL+P   L+D  KR
Sbjct: 965  GSMGSTTSVSSGTATAATHAAADLGSPSLQHSRDDSLDLSPQGRLSDVLKR 1015


>BC114556-1|AAI14557.1| 2040|Homo sapiens TRIP12 protein protein.
          Length = 2040

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
 Frame = -3

Query: 243  GGISSSAALESA-CTGATGAASELERALVAAARDQARDLAP---LADEAKR 103
            G + S+ ++ S   T AT AA++L    +  +RD + DL+P   L+D  KR
Sbjct: 1000 GSMGSTTSVSSGTATAATHAAADLGSPSLQHSRDDSLDLSPQGRLSDVLKR 1050


>BC113891-1|AAI13892.1| 1722|Homo sapiens TRIP12 protein protein.
          Length = 1722

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
 Frame = -3

Query: 243 GGISSSAALESA-CTGATGAASELERALVAAARDQARDLAP---LADEAKR 103
           G + S+ ++ S   T AT AA++L    +  +RD + DL+P   L+D  KR
Sbjct: 682 GSMGSTTSVSSGTATAATHAAADLGSPSLQHSRDDSLDLSPQGRLSDVLKR 732


>AC093384-2|AAY14681.1| 1299|Homo sapiens unknown protein.
          Length = 1299

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
 Frame = -3

Query: 243 GGISSSAALESA-CTGATGAASELERALVAAARDQARDLAP---LADEAKR 103
           G + S+ ++ S   T AT AA++L    +  +RD + DL+P   L+D  KR
Sbjct: 259 GSMGSTTSVSSGTATAATHAAADLGSPSLQHSRDDSLDLSPQGRLSDVLKR 309


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,666,616
Number of Sequences: 237096
Number of extensions: 450366
Number of successful extensions: 901
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)