Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4951
         (323 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   2.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   8.6  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -3

Query: 240 GISSSAALESAC-TGATGAASELER 169
           G+SSSA   S+C  GA  AA+ L +
Sbjct: 145 GLSSSAPTGSSCGPGAAAAAALLSK 169


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -1

Query: 131 WPHLQTKLNVSLRISHI*VSRRIVLIPFISTSL 33
           WPH   +    L I+HI  +    + P + + L
Sbjct: 493 WPHEDKRGCYQLAINHIRWNSAFAIAPAVISCL 525


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -1

Query: 131 WPHLQTKLNVSLRISHI*VSRRIVLIPFISTSL 33
           WPH   +    L I+HI  +    + P + + L
Sbjct: 583 WPHEDKRGCYQLAINHIRWNSAFAIAPAVISCL 615


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,428
Number of Sequences: 438
Number of extensions: 900
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)