Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4950
(749 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137350-1|CAB70705.1| 438|Homo sapiens hypothetical protein pr... 35 0.36
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 32 1.9
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 31 4.4
BC016987-1|AAH16987.1| 284|Homo sapiens FAM44A protein protein. 31 4.4
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 31 4.4
AB037748-1|BAA92565.2| 1804|Homo sapiens KIAA1327 protein protein. 31 4.4
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 31 4.4
U96173-1|AAD00826.1| 465|Homo sapiens hepatocyte nuclear factor... 30 7.7
AF035581-1|AAD02033.1| 465|Homo sapiens hepatocyte nuclear fact... 30 7.7
>AL137350-1|CAB70705.1| 438|Homo sapiens hypothetical protein
protein.
Length = 438
Score = 34.7 bits (76), Expect = 0.36
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 580 KTSLENDLQANEIFRKDGEYVKDEDTGDFPSQ-----LEETSDDEPLLCPNKEAKKPKE 741
KTS E + + + + EY E TG+ P Q ++ +D+P++ K+ KK K+
Sbjct: 380 KTSSETNSTTSRVMEEKDEYSSSETTGEKPEQNDDDTIKSQEEDQPIIIKRKKKKKKKK 438
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +1
Query: 472 KIPFAVYTETDVKTIHTVCDDPKLPIKEEIDIAIDSKTSLENDLQANEIFRKDGEYVKDE 651
K P +T K V ++ K P KE I + K+ ++ + + E+ K+ +E
Sbjct: 124 KSPVKEEAKTPEKAKSPVKEEAKAPEKE-IPKKEEVKSPVKEEEKPQEVKVKEPPKKAEE 182
Query: 652 DTGDFPSQLEETSDDEPLLCPNKEAKKPK 738
+ + EE D + P KEA KPK
Sbjct: 183 EKAPATPKTEEKKDSKKEEAPKKEAPKPK 211
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 31.1 bits (67), Expect = 4.4
Identities = 23/89 (25%), Positives = 39/89 (43%)
Frame = +1
Query: 472 KIPFAVYTETDVKTIHTVCDDPKLPIKEEIDIAIDSKTSLENDLQANEIFRKDGEYVKDE 651
K P ++ K + +D K P KE I + K+ ++ + + E+ K+ +E
Sbjct: 792 KSPVKEEVKSPEKAKSPLKEDAKAPEKE-IPKKEEVKSPVKEEEKPQEVKVKEPPKKAEE 850
Query: 652 DTGDFPSQLEETSDDEPLLCPNKEAKKPK 738
+ + EE D + P KEA KPK
Sbjct: 851 EKAPATPKTEEKKDSKKEEAPKKEAPKPK 879
>BC016987-1|AAH16987.1| 284|Homo sapiens FAM44A protein protein.
Length = 284
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 580 KTSLENDLQANEIFRKDGEYVKDEDTGDFPSQ-----LEETSDDEPLLCPNKEAKKPKET 744
KTS E + + + + EY E TG+ P Q ++ +D+P++ K +P++
Sbjct: 56 KTSSETNSTTSRVMEEKDEYSSSETTGEKPEQNDDDTIKSQEEDQPIIIKRKRG-RPRKY 114
Query: 745 P 747
P
Sbjct: 115 P 115
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 31.1 bits (67), Expect = 4.4
Identities = 23/89 (25%), Positives = 39/89 (43%)
Frame = +1
Query: 472 KIPFAVYTETDVKTIHTVCDDPKLPIKEEIDIAIDSKTSLENDLQANEIFRKDGEYVKDE 651
K P ++ K + +D K P KE I + K+ ++ + + E+ K+ +E
Sbjct: 792 KSPVKEEVKSPEKAKSPLKEDAKAPEKE-IPKKEEVKSPVKEEEKPQEVKVKEPPKKAEE 850
Query: 652 DTGDFPSQLEETSDDEPLLCPNKEAKKPK 738
+ + EE D + P KEA KPK
Sbjct: 851 EKAPATPKTEEKKDSKKEEAPKKEAPKPK 879
>AB037748-1|BAA92565.2| 1804|Homo sapiens KIAA1327 protein protein.
Length = 1804
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 580 KTSLENDLQANEIFRKDGEYVKDEDTGDFPSQ-----LEETSDDEPLLCPNKEAKKPKET 744
KTS E + + + + EY E TG+ P Q ++ +D+P++ K +P++
Sbjct: 1576 KTSSETNSTTSRVMEEKDEYSSSETTGEKPEQNDDDTIKSQEEDQPIIIKRKRG-RPRKY 1634
Query: 745 P 747
P
Sbjct: 1635 P 1635
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 31.1 bits (67), Expect = 4.4
Identities = 23/89 (25%), Positives = 39/89 (43%)
Frame = +1
Query: 472 KIPFAVYTETDVKTIHTVCDDPKLPIKEEIDIAIDSKTSLENDLQANEIFRKDGEYVKDE 651
K P ++ K + +D K P KE I + K+ ++ + + E+ K+ +E
Sbjct: 800 KSPVKEEVKSPEKAKSPLKEDAKAPEKE-IPKKEEVKSPVKEEEKPQEVKVKEPPKKAEE 858
Query: 652 DTGDFPSQLEETSDDEPLLCPNKEAKKPK 738
+ + EE D + P KEA KPK
Sbjct: 859 EKAPATPKTEEKKDSKKEEAPKKEAPKPK 887
>U96173-1|AAD00826.1| 465|Homo sapiens hepatocyte nuclear factor-6
alpha protein.
Length = 465
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 457 DRSNL-KIPFAVYTETDVKTIHTVCDDPKLPIKEEIDIAIDSKTSLENDLQAN 612
DR N K P V+T+ +T+H + + K P K E+ I I + LE +N
Sbjct: 380 DRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSK-ELQITISQQLGLELSTVSN 431
>AF035581-1|AAD02033.1| 465|Homo sapiens hepatocyte nuclear factor
6 protein.
Length = 465
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 457 DRSNL-KIPFAVYTETDVKTIHTVCDDPKLPIKEEIDIAIDSKTSLENDLQAN 612
DR N K P V+T+ +T+H + + K P K E+ I I + LE +N
Sbjct: 380 DRGNTPKKPRLVFTDVQRRTLHAIFKENKRPSK-ELQITISQQLGLELSTVSN 431
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,365,268
Number of Sequences: 237096
Number of extensions: 1835156
Number of successful extensions: 4502
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4489
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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