Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4950
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 36 0.041
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 31 0.87
U46676-1|AAY86202.1| 184|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 29 2.7
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 29 2.7
U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical p... 29 3.5
U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical p... 29 3.5
Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 4.7
U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily ass... 29 4.7
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 28 6.2
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 28 6.2
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z73906-6|CAA98113.1| 824|Caenorhabditis elegans Hypothetical pr... 28 6.2
U97003-4|AAB52268.2| 370|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 28 6.2
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical p... 28 8.1
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF160248-1|AAD45518.1| 860|Caenorhabditis elegans ribonuclease ... 28 8.1
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 35.5 bits (78), Expect = 0.041
Identities = 32/100 (32%), Positives = 45/100 (45%)
Frame = +1
Query: 442 SVQELDRSNLKIPFAVYTETDVKTIHTVCDDPKLPIKEEIDIAIDSKTSLENDLQANEIF 621
+V E DR N + P E + T DD ++P K EID A D E D + E
Sbjct: 3781 NVDERDRENDERP-----EDQMDTSDPSKDD-EIPEKGEIDEAEDEDDGDETDKEDEEAI 3834
Query: 622 RKDGEYVKDEDTGDFPSQLEETSDDEPLLCPNKEAKKPKE 741
DGE ++ED D +LE+ + ++E KK E
Sbjct: 3835 EGDGEEDQNEDQND--QELEDPTQTNEENEDSEEQKKEDE 3872
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 31.1 bits (67), Expect = 0.87
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 550 KEEIDIAIDSKTSLENDLQANEIFRKDGEYVKDEDTG---DFPSQLEETSDDEPLLCPNK 720
K+ D + DS S ++ +++ +K + K ++ G D +++SDDE K
Sbjct: 135 KDSSDDSSDSSDSSDSSDSSDDDKKKKKKSKKSKNKGSSSDSSDSSDDSSDDEKPKKKKK 194
Query: 721 EAKKPKETP 747
++KKPK+ P
Sbjct: 195 KSKKPKKAP 203
>U46676-1|AAY86202.1| 184|Caenorhabditis elegans Hypothetical
protein F23G4.1 protein.
Length = 184
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +3
Query: 294 SCLFYGFAAVCVLCMCSIIA 353
+C+ +G A C+LCMC+I++
Sbjct: 85 TCMCFGLAMQCLLCMCAIVS 104
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 583 TSLENDLQANEIFRKDGEYVKDEDTGDFPSQLEETSDDE 699
T + +DL+A E +KD + KD+ GD + ++ D+E
Sbjct: 420 TVVSDDLKAEEESKKDKDKEKDKQIGDLTEEEKKGKDEE 458
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 583 TSLENDLQANEIFRKDGEYVKDEDTGDFPSQLEETSDDE 699
T + +DL+A E +KD + KD+ GD + ++ D+E
Sbjct: 420 TVVSDDLKAEEESKKDKDKEKDKQIGDLTEEEKKGKDEE 458
>U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical
protein T22F3.11b protein.
Length = 375
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -3
Query: 738 FWL-LSFFIWA*KRFVVACLF*LRR---EIPRILIFHILAI 628
FW+ L FIW R+V A L R E+P+ILIF+ +A+
Sbjct: 287 FWVALVLFIWLPVRWVAAVLSDKIRCIGELPKILIFNTIAV 327
>U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical
protein T22F3.11a protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -3
Query: 738 FWL-LSFFIWA*KRFVVACLF*LRR---EIPRILIFHILAI 628
FW+ L FIW R+V A L R E+P+ILIF+ +A+
Sbjct: 287 FWVALVLFIWLPVRWVAAVLSDKIRCIGELPKILIFNTIAV 327
>Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical
protein D2005.4 protein.
Length = 1188
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +1
Query: 436 VTSVQELDRSNLKIPFAVYTETDVKTIHTVCDDPKLPIKEEIDIAIDSKTSLENDLQANE 615
V+SV E+D+ N+K V + V D+ ++PI++ ID + + +N +
Sbjct: 28 VSSVSEVDQENVKNTLHVIENKVEEPESAVVDEVEVPIEKIID-CLGVEAREDNGKVEDN 86
Query: 616 IFRKDGE-----YVKDEDTGDFPSQLE 681
+F E VKD D D + +E
Sbjct: 87 VFESQDEAAGLDAVKDTDKKDEAATME 113
>U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily
assigned gene nameprotein 292 protein.
Length = 722
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 583 TSLENDLQANEIFRKDGEYVKDEDTGDFPSQLEETSDDEPLLCPNKEAKKPKETP 747
T L+N++ F+KDGE + ++ ++ T D++ ++ + K+P E P
Sbjct: 161 TRLDNEITPLSKFQKDGEQIILKEYFKNQYDIDITDDEQFIIISEGKPKQPGEPP 215
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 364 RFKTKCLLGQSVLYQILNSGKKITVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 534
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 361 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 418
Query: 535 PKLPIKEEIDIAIDSKTSLEN 597
P +ID + S+ N
Sbjct: 419 NSAP-----QFSIDQRRSVHN 434
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 364 RFKTKCLLGQSVLYQILNSGKKITVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 534
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 130 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 187
Query: 535 PKLPIKEEIDIAIDSKTSLEN 597
P +ID + S+ N
Sbjct: 188 NSAP-----QFSIDQRRSVHN 203
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 364 RFKTKCLLGQSVLYQILNSGKKITVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 534
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 128 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 185
Query: 535 PKLPIKEEIDIAIDSKTSLEN 597
P +ID + S+ N
Sbjct: 186 NSAP-----QFSIDQRRSVHN 201
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 364 RFKTKCLLGQSVLYQILNSGKKITVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 534
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 186 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 243
Query: 535 PKLPIKEEIDIAIDSKTSLEN 597
P +ID + S+ N
Sbjct: 244 NSAP-----QFSIDQRRSVHN 259
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 364 RFKTKCLLGQSVLYQILNSGKKITVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 534
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 361 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 418
Query: 535 PKLPIKEEIDIAIDSKTSLEN 597
P +ID + S+ N
Sbjct: 419 NSAP-----QFSIDQRRSVHN 434
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 364 RFKTKCLLGQSVLYQILNSGKKITVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 534
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 130 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 187
Query: 535 PKLPIKEEIDIAIDSKTSLEN 597
P +ID + S+ N
Sbjct: 188 NSAP-----QFSIDQRRSVHN 203
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 364 RFKTKCLLGQSVLYQILNSGKKITVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 534
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 128 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 185
Query: 535 PKLPIKEEIDIAIDSKTSLEN 597
P +ID + S+ N
Sbjct: 186 NSAP-----QFSIDQRRSVHN 201
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 364 RFKTKCLLGQSVLYQILNSGKKITVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 534
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 186 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 243
Query: 535 PKLPIKEEIDIAIDSKTSLEN 597
P +ID + S+ N
Sbjct: 244 NSAP-----QFSIDQRRSVHN 259
>Z73906-6|CAA98113.1| 824|Caenorhabditis elegans Hypothetical
protein D2030.6 protein.
Length = 824
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 583 TSLENDLQANEIFRKDGEYVKDEDTGDFPSQLEETSDDEPLLCPNKEAKKPKETP 747
T L+ + F KDG+ + ++ +E T DD+P++ + K+P E P
Sbjct: 263 TRLDYSISPLSEFVKDGQSITLKEYFKNQYGIEITVDDQPIIISEGKPKQPGEPP 317
>U97003-4|AAB52268.2| 370|Caenorhabditis elegans Hypothetical
protein F47C10.3 protein.
Length = 370
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -1
Query: 383 KHLVLNLLYFCNNAAH 336
+H++LNL+ FCN+A H
Sbjct: 274 EHMLLNLILFCNSALH 289
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +1
Query: 559 IDIAIDSKTSLENDLQANEIFRKDGEYVKDEDTGDFPSQLEETSDDEPLLCPNKEAKK 732
+D I SK LEN L+ E+ + GEY D D+ D EET + L +E +K
Sbjct: 491 VDPEIQSK--LENLLREEELLEQAGEYESDLDSDD-----EETKEKLKLALQIREKEK 541
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +1
Query: 559 IDIAIDSKTSLENDLQANEIFRKDGEYVKDEDTGDFPSQLEETSDDEPLLCPNKEAKK 732
+D I SK LEN L+ E+ + GEY D D+ D EET + L +E +K
Sbjct: 491 VDPEIQSK--LENLLREEELLEQAGEYESDLDSDD-----EETKEKLKLALQIREKEK 541
>Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical
protein F26E4.10 protein.
Length = 1086
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 302 QTGLTPNVSSK*VCNGLDCRLYILTLNCKHIRHTDSLSMFDEFIYEFMFTKR 147
+TGL P+V++ + + L C HIR+ SL +F+E I E+ F R
Sbjct: 580 ETGLKPDVAA---------HVVMTILACHHIRYNFSLDVFEEVI-EYKFNDR 621
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +1
Query: 352 QKYSRFKTKCLLGQSVLYQILNSGKKITVTSVQELDRSNLKIPFAVYTETDVKTIHTVCD 531
Q+Y ++ KC + + ++++S + V+EL R I +A Y VK T D
Sbjct: 1762 QEYEEYRKKCKKTTTKVTKVIDSCDDV---KVEELSR----IEYAKYKSRCVKET-TPSD 1813
Query: 532 DPKLPIKEEIDIAIDSKTSLEND 600
P I++ ID +I ++ + +
Sbjct: 1814 TPPTKIRKRIDCSIVDESMMSEE 1836
>AF160248-1|AAD45518.1| 860|Caenorhabditis elegans ribonuclease
protein.
Length = 860
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 302 QTGLTPNVSSK*VCNGLDCRLYILTLNCKHIRHTDSLSMFDEFIYEFMFTKR 147
+TGL P+V++ + + L C HIR+ SL +F+E I E+ F R
Sbjct: 354 ETGLKPDVAA---------HVVMTILACHHIRYNFSLDVFEEVI-EYKFNDR 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,193,919
Number of Sequences: 27780
Number of extensions: 331218
Number of successful extensions: 1106
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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