Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4946
(606 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0559 + 18516732-18516746,18516893-18517330 35 0.043
07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 31 0.94
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 31 0.94
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 31 0.94
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 29 2.2
02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523,134... 29 2.9
05_03_0066 + 7980038-7981468 29 3.8
08_02_1167 + 24847689-24848156 28 5.0
06_03_1500 + 30602846-30603185,30603244-30603323,30603477-306035... 28 5.0
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 28 5.0
01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384 28 5.0
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 28 6.6
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 28 6.6
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 28 6.6
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 27 8.7
06_03_0789 + 24630552-24631171,24631240-24631279,24632422-246324... 27 8.7
>09_04_0559 + 18516732-18516746,18516893-18517330
Length = 150
Score = 35.1 bits (77), Expect = 0.043
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 274 DEVPAIP-EAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVE-- 444
+E PA P EA ++ AP ++++A K +E AE ++ K E
Sbjct: 35 EETPAAPAEAVAEEAAPAEAEVAETKEAEPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVA 94
Query: 445 -EPAA--QPEDSKTEVQATVAEISKEEKPSATDA 537
EPAA + E + E A VAE KEE+ + A
Sbjct: 95 PEPAAAAEAEAKEAEPAAQVAEEVKEEEAAPAPA 128
Score = 31.1 bits (67), Expect = 0.71
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Frame = +1
Query: 388 AKSSEIPDAEAKSADIKVEEPA-----------AQPEDSKTEVQATVAEISKEEKPSATD 534
A + E AEA+ A+ K EPA A+PE ++ E + E++ E +A
Sbjct: 44 AVAEEAAPAEAEVAETKEAEPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVAPEPAAAAEA 103
Query: 535 AKGSADSAAIIPNMVKKIDLAP 600
A+ AA + VK+ + AP
Sbjct: 104 EAKEAEPAAQVAEEVKEEEAAP 125
>07_01_0513 +
3828196-3828309,3828408-3828722,3828823-3828879,
3829668-3829826,3829918-3830028,3830173-3830259,
3830359-3830591,3830808-3830886,3831173-3831316,
3831529-3831568,3831667-3831729,3832193-3832224,
3832320-3832361,3832444-3832557
Length = 529
Score = 30.7 bits (66), Expect = 0.94
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +1
Query: 415 EAKSADIKVEEPAAQPEDSKTE--VQATVAEISK--EEKPSAT-DAKGS 546
E++S DIK + +AQP +K E VQAT++ + K EEK T KGS
Sbjct: 394 ESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKKAEEKKRCTRSPKGS 442
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 30.7 bits (66), Expect = 0.94
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 415 EAKSADIKVEEPAAQPEDSKTEVQATVAEI-SKEEK--PSATDA-KGSADSAAIIPNMVK 582
E++ V AA S+ EV A + SK + SATD+ K SAD A ++P
Sbjct: 552 ESRKESTDVASAAAPKTSSRMEVAPDSAPLLSKAGRRVESATDSRKESADVAPVVPRTTS 611
Query: 583 KIDLAP 600
++++AP
Sbjct: 612 RMEMAP 617
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 30.7 bits (66), Expect = 0.94
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1
Query: 397 SEIPDAEAKSADIKVEEP---AAQPEDSKTEVQATVAEISKEEKPS 525
+E P AEA S + K EEP AA E +K E +A A ++E KP+
Sbjct: 167 TEEPKAEASSEEAKTEEPKAEAAADEPAKEESKAEAAP-AEEAKPA 211
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +1
Query: 388 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAKGSADSAA 561
A ++E P AEA++ E AA E+ KTE T E +KEE+P A A + + A
Sbjct: 133 APAAEEPKAEAEA-----EAEAAATEEPKTEEPKT-EEPAKEEEPKAAAAAAAEEPKA 184
>02_01_0201 -
1347868-1347925,1348040-1348135,1348447-1348523,
1349385-1349453,1349576-1349629,1350295-1350350,
1350487-1350694,1350978-1351066,1351163-1351187
Length = 243
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 488 ACTSVFESSG*AAGSSTLISADFASASGISDDF 390
+CT +F+SS +A + ++A FA AS D+F
Sbjct: 64 SCTYIFDSSDASASGAADVAATFAKASRKMDEF 96
>05_03_0066 + 7980038-7981468
Length = 476
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 391 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAKGSADSAAIIP 570
K+ ++ D + K KVE + E SK E+ + E SKEE S A+SA+ +
Sbjct: 388 KAKKVLDRKLKEK--KVESNSTVTEKSK-ELTSRETEESKEELTSRKTDANDAESASSVA 444
Query: 571 NMVKK 585
+KK
Sbjct: 445 EAIKK 449
>08_02_1167 + 24847689-24848156
Length = 155
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 388 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 489
AK E P+AEA++A VEE AA P + E +A
Sbjct: 108 AKEPE-PEAEAEAAAAPVEEAAAAPVEVAEEAEA 140
>06_03_1500 +
30602846-30603185,30603244-30603323,30603477-30603566,
30603677-30603909,30604126-30604204,30604320-30604464,
30604815-30604877,30605343-30605374,30605475-30605516,
30605599-30605712
Length = 405
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Frame = +1
Query: 415 EAKSADIKVEEPAAQPEDSKTE--VQATVAEISK--EEK--PSATDAKGSAD 552
E++S DIK + +AQP +K E VQAT++ + K EEK P+A + S +
Sbjct: 283 ESQSEDIKPADWSAQPISAKKEPLVQATLSSMFKKAEEKKGPAAKKQRASPE 334
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Frame = +1
Query: 283 PAIPEAKK--------DDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIK 438
P IPE+K+ + +P++ DI +S +P++ + + DIK
Sbjct: 1272 PQIPESKELSQQSKILPESSPDNHDIKCEYSSPTPIPESKELSLQSKILPESSSDNQDIK 1331
Query: 439 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAKGSADSAAII 567
E+P+ P EV + ++I E D + S+ +I
Sbjct: 1332 CEDPSPTPISKSKEV-SPQSKILSESYLDNQDVERECPSSILI 1373
>01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384
Length = 335
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 58 VASQGSIFKMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEV 186
+ S G + ++ LLLC+A AA + A+P A P P+ E+
Sbjct: 98 IGSAGDLGWIEYLLLCLAPAAAAAALPCAATSPTPPC-PLREL 139
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 409 DAEAKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAKGSADS 555
+++ S D ++ A +P D +TE++ TV ++ E + G D+
Sbjct: 32 ESQGPSGDQTLDSDVANEPNDGETEIETTVDDVLSESTHEQVENHGDGDN 81
>09_04_0247 + 16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 409 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAKGSADSA 558
D + K++ +K EE + SKTE A + KEEK A D+ +A++A
Sbjct: 1268 DPDFKNSYLKKEE-STDDASSKTEETTNNASLQKEEK--ANDSSKNAENA 1314
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 445 EPAAQPEDSKTEVQATVAEISKEEKPSATDAKG 543
EP A PE + + Q + +K+ PSA D G
Sbjct: 132 EPPAPPEPKQQQQQQQAGDAAKQAAPSADDEDG 164
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 391 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP 522
KS + + +S D K + + +P+ SK Q ++SKE KP
Sbjct: 160 KSWKDSKSSKESKDSKSSKESKEPKPSKDSKQLKPPKVSKESKP 203
>06_03_0789 +
24630552-24631171,24631240-24631279,24632422-24632486,
24632615-24632660,24633222-24633314,24633736-24633855,
24633931-24633982,24634051-24634123,24634350-24634416,
24634670-24634720,24635026-24635118,24635207-24635308
Length = 473
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 409 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAKGSA 549
D A+ EE + + ED E TV + KP DAK A
Sbjct: 18 DGPVDEANAVEEEKSGKGEDGIEEAADTVDSVKDSAKPEGMDAKEEA 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.127 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,341,940
Number of Sequences: 37544
Number of extensions: 190069
Number of successful extensions: 481
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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