Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4931
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    36   0.032
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    32   0.39 
Z49888-6|CAD44128.1|  428|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z49888-5|CAA90065.2|  409|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z47069-5|CAD44131.1|  428|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z47069-4|CAA87339.2|  409|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF040647-2|AAB94995.3|  299|Caenorhabditis elegans Hypothetical ...    30   1.6  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 35.9 bits (79), Expect = 0.032
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +2

Query: 11  TGVATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGT-SVCNGDSGGGMVF 187
           + ++   L  + +P++ T  C  S   +  R       CAGY  G    C GDSGG ++ 
Sbjct: 189 SSLSAPTLREIHVPLLSTLFC-SSLPNYIGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMC 247

Query: 188 KFGESWYLRGLVSLSV 235
                W L G+VS  +
Sbjct: 248 ARDGHWELTGVVSWGI 263


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 119 TYCAGYRDGTSVCNGDSGGGMVFKFGES 202
           ++C    +  +VC+GDSGGG+ F   +S
Sbjct: 258 SFCTAEEEDKNVCSGDSGGGLTFHQSDS 285


>Z49888-6|CAD44128.1|  428|Caenorhabditis elegans Hypothetical
           protein F47A4.1b protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 391 FEIGLTFCFYQSYWILPGIGYIVSPPCRHEVELNWTEITTV 513
           FEI L   +   YW  PG+ Y +  PC+  +  +W  +  +
Sbjct: 103 FEIDL---YMNEYWTDPGLAYDILNPCQGNLSFDWAVMQNI 140


>Z49888-5|CAA90065.2|  409|Caenorhabditis elegans Hypothetical
           protein F47A4.1a protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 391 FEIGLTFCFYQSYWILPGIGYIVSPPCRHEVELNWTEITTV 513
           FEI L   +   YW  PG+ Y +  PC+  +  +W  +  +
Sbjct: 84  FEIDL---YMNEYWTDPGLAYDILNPCQGNLSFDWAVMQNI 121


>Z47069-5|CAD44131.1|  428|Caenorhabditis elegans Hypothetical
           protein F47A4.1b protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 391 FEIGLTFCFYQSYWILPGIGYIVSPPCRHEVELNWTEITTV 513
           FEI L   +   YW  PG+ Y +  PC+  +  +W  +  +
Sbjct: 103 FEIDL---YMNEYWTDPGLAYDILNPCQGNLSFDWAVMQNI 140


>Z47069-4|CAA87339.2|  409|Caenorhabditis elegans Hypothetical
           protein F47A4.1a protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 391 FEIGLTFCFYQSYWILPGIGYIVSPPCRHEVELNWTEITTV 513
           FEI L   +   YW  PG+ Y +  PC+  +  +W  +  +
Sbjct: 84  FEIDL---YMNEYWTDPGLAYDILNPCQGNLSFDWAVMQNI 121


>AF040647-2|AAB94995.3|  299|Caenorhabditis elegans Hypothetical
           protein F54D12.5 protein.
          Length = 299

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 60  TLKPASGLTANSSSDLHRSTLTAPDIEMEHRSVTATVVAEWSSSL-ARAGTSG 215
           T K   G+   + ++LH +T  +P +   H+   +T     SSSL A AGT G
Sbjct: 173 TDKIMRGIDVETLTNLHTTTEPSPPLPRHHQIQASTTAGATSSSLSAAAGTRG 225


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 78   GLTANSSSDL-HRSTLTAPDIEMEHRSVTATVVAEWSSSLARAGTSGAWCRSPWPGRTNA 254
            G T  SSS +   S  T P         T T  +  S+S   + TSGA   S  PG T  
Sbjct: 960  GSTEGSSSPIPSTSQNTNPSTSSGSSMSTQTPQSSQSTSPVESSTSGATSSSGSPGTTLT 1019

Query: 255  DVTPA 269
             ++P+
Sbjct: 1020 SISPS 1024


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,718,915
Number of Sequences: 27780
Number of extensions: 414949
Number of successful extensions: 1150
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)