Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4922
         (588 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.73 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.8  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   9.0  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.0  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -3

Query: 262 VLWRRQK---KSHNDPEIRVHGDKSFKTTNV 179
           ++WRR     ++ N+PEIRV  D S   T V
Sbjct: 342 LVWRRNGADLETLNEPEIRVFNDGSLYLTKV 372


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 226 DRCGISFGVSTILLKQRSGNFFNYYPKIFLCNLILPHGEEQTKKT 360
           D CG SFG + +L   +     +Y  K++ C L   H    +KKT
Sbjct: 235 DICGKSFGYNHVL---KLHQVAHYGEKVYKCTLC--HETFGSKKT 274


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 373 KEAITFFLFVLRHGVI 326
           KEA+  F+ +L+HG++
Sbjct: 74  KEAVNEFMQLLKHGML 89


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 373 KEAITFFLFVLRHGVI 326
           KEA+  F+ +L+HG++
Sbjct: 74  KEAVNEFMQLLKHGML 89


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 234 TTIPR*ESMETNLLRPRMSNSEGMILRH 151
           +T+P  + M T   RP+   S+G    H
Sbjct: 26  STMPMPDDMRTVTKRPKTKKSQGSRTTH 53


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 521 APTEKKMSRPGPLADVKS 574
           AP   K +RP P AD+ S
Sbjct: 222 APEVIKQNRPTPAADIYS 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,017
Number of Sequences: 438
Number of extensions: 3290
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)