Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4918
         (401 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28729-6|AAA68292.1|  549|Caenorhabditis elegans Phosphodiestera...    26   8.8  
U28729-5|AAO38607.1|  674|Caenorhabditis elegans Phosphodiestera...    26   8.8  
U28729-4|AAN60496.1|  599|Caenorhabditis elegans Phosphodiestera...    26   8.8  
U28729-3|AAO38608.1|  612|Caenorhabditis elegans Phosphodiestera...    26   8.8  
U28729-2|AAK77625.1|  626|Caenorhabditis elegans Phosphodiestera...    26   8.8  
U28729-1|ABB88209.1|  673|Caenorhabditis elegans Phosphodiestera...    26   8.8  
AF003384-2|AAL08040.1|  428|Caenorhabditis elegans Acyltransfera...    26   8.8  
AF003384-1|AAK71374.2|  415|Caenorhabditis elegans Acyltransfera...    26   8.8  

>U28729-6|AAA68292.1|  549|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoforma protein.
          Length = 549

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 214 FCNEQVNHISTVAYIHKLDSAAFRSNLNRNIDNVVTISPKKKQIS 80
           +C +Q+  I T   + ++ S+ FR  LN+ + +    S    Q+S
Sbjct: 95  WCLDQLETIQTHRSVSEMASSKFRKMLNKELSHFAESSKSGTQVS 139


>U28729-5|AAO38607.1|  674|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformd protein.
          Length = 674

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 214 FCNEQVNHISTVAYIHKLDSAAFRSNLNRNIDNVVTISPKKKQIS 80
           +C +Q+  I T   + ++ S+ FR  LN+ + +    S    Q+S
Sbjct: 220 WCLDQLETIQTHRSVSEMASSKFRKMLNKELSHFAESSKSGTQVS 264


>U28729-4|AAN60496.1|  599|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformc protein.
          Length = 599

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 214 FCNEQVNHISTVAYIHKLDSAAFRSNLNRNIDNVVTISPKKKQIS 80
           +C +Q+  I T   + ++ S+ FR  LN+ + +    S    Q+S
Sbjct: 145 WCLDQLETIQTHRSVSEMASSKFRKMLNKELSHFAESSKSGTQVS 189


>U28729-3|AAO38608.1|  612|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoforme protein.
          Length = 612

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 214 FCNEQVNHISTVAYIHKLDSAAFRSNLNRNIDNVVTISPKKKQIS 80
           +C +Q+  I T   + ++ S+ FR  LN+ + +    S    Q+S
Sbjct: 158 WCLDQLETIQTHRSVSEMASSKFRKMLNKELSHFAESSKSGTQVS 202


>U28729-2|AAK77625.1|  626|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformb protein.
          Length = 626

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 214 FCNEQVNHISTVAYIHKLDSAAFRSNLNRNIDNVVTISPKKKQIS 80
           +C +Q+  I T   + ++ S+ FR  LN+ + +    S    Q+S
Sbjct: 172 WCLDQLETIQTHRSVSEMASSKFRKMLNKELSHFAESSKSGTQVS 216


>U28729-1|ABB88209.1|  673|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformg protein.
          Length = 673

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 214 FCNEQVNHISTVAYIHKLDSAAFRSNLNRNIDNVVTISPKKKQIS 80
           +C +Q+  I T   + ++ S+ FR  LN+ + +    S    Q+S
Sbjct: 219 WCLDQLETIQTHRSVSEMASSKFRKMLNKELSHFAESSKSGTQVS 263


>AF003384-2|AAL08040.1|  428|Caenorhabditis elegans
           Acyltransferase-like protein 14,isoform b protein.
          Length = 428

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 181 RLKCDLLVHYKI--SISK*YRDESKETHWDFVVF 276
           R KCD+ V+YKI  +    + DE K   W + V+
Sbjct: 328 REKCDIAVNYKIYDAAEVPFEDEEKLRDWMYEVY 361


>AF003384-1|AAK71374.2|  415|Caenorhabditis elegans
           Acyltransferase-like protein 14,isoform a protein.
          Length = 415

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 181 RLKCDLLVHYKI--SISK*YRDESKETHWDFVVF 276
           R KCD+ V+YKI  +    + DE K   W + V+
Sbjct: 315 REKCDIAVNYKIYDAAEVPFEDEEKLRDWMYEVY 348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,821,963
Number of Sequences: 27780
Number of extensions: 125482
Number of successful extensions: 329
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)