Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4913
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0904 + 25832026-25832643 152 2e-37
11_08_0073 - 28155156-28155296,28155422-28155682,28155858-281559... 83 2e-16
07_01_0908 + 7653813-7653849,7655220-7655350,7655946-7656020,765... 73 2e-13
06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306... 33 0.24
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 30 2.3
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 29 3.9
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 29 5.2
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 29 5.2
01_06_1473 - 37619415-37619561,37619649-37619723,37619800-376199... 29 5.2
05_07_0140 - 27982037-27983794 28 9.1
03_05_0109 - 20903013-20903062,20903406-20903538,20903631-209037... 28 9.1
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 28 9.1
01_06_1546 + 38147846-38147853,38148413-38148986,38149160-38150011 28 9.1
>06_03_0904 + 25832026-25832643
Length = 205
Score = 152 bits (369), Expect = 2e-37
Identities = 71/169 (42%), Positives = 117/169 (69%)
Frame = +1
Query: 202 LFNLKFAVKELERNSXXXXXXXXXXXXXXXXAIQKGNMEGARIHAENAIRQKNQALNYLR 381
+F+LKF K L+R + AI+KGNM+GARI+AENAIR++ + +NYLR
Sbjct: 11 IFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIRKRTEHMNYLR 70
Query: 382 MSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTLMDKFESQFEDLDV 561
+++R+DAV +R+ T + + SMA +VK++D+A+ + NL+K+S MD FE QF +++V
Sbjct: 71 LASRLDAVVARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDNFERQFVNMEV 130
Query: 562 QSSYMENAMSQTTTTTVPQGDVDNLLQQVADEAGLELNMELPSGGSEHI 708
Q+ +ME AM+ +T+ + P+ +V++L+QQVAD+ GLE+++ LP + I
Sbjct: 131 QAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAI 179
>11_08_0073 -
28155156-28155296,28155422-28155682,28155858-28155962,
28156563-28156693,28156905-28156941
Length = 224
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/155 (27%), Positives = 80/155 (51%)
Frame = +1
Query: 220 AVKELERNSXXXXXXXXXXXXXXXXAIQKGNMEGARIHAENAIRQKNQALNYLRMSARVD 399
+++E+ER ++G M +I A++ IR ++Q + + +++
Sbjct: 25 SIREIERERQGLQAQEKKLIAEIKKVAKQGQMGAVKIMAKDLIRTRHQITKFYALKSQLQ 84
Query: 400 AVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTLMDKFESQFEDLDVQSSYME 579
VS R+QT +T+ + +M GV KAM + MNL + +M +FE Q E +++ SS M
Sbjct: 85 GVSLRIQTLKSTQAMGEAMKGVTKAMRQMNRQMNLPALQKIMREFEIQNEKMEIVSSTMN 144
Query: 580 NAMSQTTTTTVPQGDVDNLLQQVADEAGLELNMEL 684
+A+ + + + L+ QV DE G+++N EL
Sbjct: 145 DAIDDALEGDEEEEETEELVNQVLDEIGIDVNSEL 179
>07_01_0908 +
7653813-7653849,7655220-7655350,7655946-7656020,
7657007-7657111,7657648-7657911,7658474-7658614
Length = 250
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/127 (31%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Frame = +1
Query: 310 NMEGA-RIHAENAIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAA 486
N +GA ++ A++ IR ++Q + ++ +++ VS RVQT +T+ + ++M GV KAM
Sbjct: 79 NGQGAVKVMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKSTQAMGDAMKGVTKAMGQM 138
Query: 487 MKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQ-GDVDNLLQQVADEAG 663
+ +NL + +M +FE Q E +++ S M +A+ Q + + L+ QV DE G
Sbjct: 139 NRQLNLPGLQRIMMEFERQNERMEMTSEVMGDAIDDALEGDEDQEEETEELVNQVLDEIG 198
Query: 664 LELNMEL 684
+++N EL
Sbjct: 199 IDINQEL 205
>06_02_0046 + 10928708-10928798,10929997-10930077,10930567-10930685,
10931275-10931894,10931992-10933184,10933280-10933359,
10933751-10933846,10933931-10934004,10936007-10936151,
10936323-10936487
Length = 887
Score = 33.1 bits (72), Expect = 0.24
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Frame = +1
Query: 328 IHAENAIRQKNQALNYLRMSARVDAVSSRVQTALTTR-KVTNSMAGVVKAMDAAMKSMNL 504
I E + +Q + SA + S++ T+ T++ KV S +A+ A +
Sbjct: 663 ISKEAKLASLSQPVGATSASASIQGSSAQASTSTTSQSKVVRSKK---RAVSVATSLRSN 719
Query: 505 EKISTLMDKFESQFEDL-DVQSSYMENAMSQTTTTTVPQGDVDN-LLQQVADEAGLELNM 678
+K+S+L+DK+++ E+L D + E+A+ Q D+D QQ+A E
Sbjct: 720 KKVSSLVDKWKAAKEELRDEEDEEPESALDALERKR--QKDIDEWRKQQIASGEAQENAN 777
Query: 679 ELPSGG 696
+P GG
Sbjct: 778 FVPLGG 783
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +1
Query: 304 KGNMEGARIHAENAIRQKNQA---LNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKA 474
+G +EG R NAI+ + +A + + A++ + + + K SM+ V+K
Sbjct: 285 EGAVEGLRADVANAIKARREADGLVGEWKKKAQLFEIKLELANQSSILK-AESMSSVMKE 343
Query: 475 MDAAMKSMNLE--KISTLMDKFES 540
+DAA + ++ +I+ L DK ES
Sbjct: 344 LDAANALLQVKESQIALLHDKIES 367
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 669 AKYGTSFWGFRAHLLVPQLV 728
A+ G+ FWGF H +VP +V
Sbjct: 283 ARVGSHFWGFETHGVVPDIV 302
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = +1
Query: 325 RIHAENAIRQKNQALNYLRMSARVDAVSSRVQTAL--TTRKVTNSMAGVVKAMDAAMKSM 498
+I E + N + ++A++ + +++ T R+V+ +++A D A
Sbjct: 1021 KIEKEKTVELSNLEREVISLTAQLSSTEEERESSTLDTIREVS-----ILRA-DKAKLEA 1074
Query: 499 NLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQ----GDVDNLLQQVADEAGL 666
NLE ++ M +ESQ EDL + +++ + + + DVDN+ + +
Sbjct: 1075 NLEDVNAQMIHYESQLEDLRESKTKIKDLVDSLNASKQNEEMLTTDVDNMRRSIEAARSN 1134
Query: 667 ELNM 678
E N+
Sbjct: 1135 EDNL 1138
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 669 AKYGTSFWGFRAHLLVPQLV 728
A+ G+ FWGF +H ++P +V
Sbjct: 305 ARTGSHFWGFESHGVIPDIV 324
>01_06_1473 -
37619415-37619561,37619649-37619723,37619800-37619919,
37620074-37620127,37620204-37620426,37620506-37620585,
37620675-37620764,37620847-37620960,37621192-37621272,
37621383-37621490,37621677-37621722,37621802-37621899,
37621975-37622148,37622456-37622548,37623229-37623285,
37623399-37623438,37623567-37623685,37624179-37624298,
37624723-37624815,37624940-37625251,37625325-37625444,
37625545-37625658,37625731-37625910,37625996-37626110,
37626195-37626358,37626584-37626769,37626888-37626978,
37627089-37627153,37627223-37627297,37627410-37627493,
37627575-37627742,37628160-37629293
Length = 1579
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 745 SSVLGNTSCGTNRCARNPQKEVPY----LAPTQLHLQPVEVNYQRLP 617
S + G C T C+R+ KEV Y LA TQL + EV+ +P
Sbjct: 734 SCIAGRLLCDTYLCSRDLLKEVSYSLTQLAETQLKKERKEVSPHDIP 780
>05_07_0140 - 27982037-27983794
Length = 585
Score = 27.9 bits (59), Expect = 9.1
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = +1
Query: 445 TNSMAGVVKAM-DAAMKSMNLEKISTLMDKFESQFEDLDVQSS-----YMENAMSQTTTT 606
T++M G+VK++ D MK K + D + Q +V S Y+E + +
Sbjct: 485 TSNMWGIVKSIVDICMK-FEEGKYVLVKDPAKPQVRIYEVPSDAFENDYVEEPLPEEEQV 543
Query: 607 TVPQGDVDNLLQQVADEAGLELNMELPSGGSE 702
P DVD +++ A E N S G E
Sbjct: 544 RPPSDDVDATAEEMDAAAEAEANNAAASAGGE 575
>03_05_0109 -
20903013-20903062,20903406-20903538,20903631-20903726,
20904011-20904168,20904278-20904392,20904486-20904539,
20904818-20904925,20905406-20905495,20905907-20906086,
20906204-20906516,20906619-20906794
Length = 490
Score = 27.9 bits (59), Expect = 9.1
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 325 RIHAE-NAIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMN 501
++ AE N+++QK N +++ R +A + + T RK+ S +VK A S
Sbjct: 184 QLEAEVNSLKQKLVEYNKKQLALRANATAINDKKEETHRKIAKSDFELVKL--AQENSKL 241
Query: 502 LEKISTLMDKFESQFEDLDVQSSYMENA 585
L KI +K + E+ + ++NA
Sbjct: 242 LSKIVQSPEKLQRALEEKKTARAELKNA 269
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +1
Query: 487 MKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQVADEAGL 666
+ S +EK+ ++ K E + +D+D Q + + V +V + + D G
Sbjct: 673 VSSALIEKVDAMLQKLEKEIDDVDAQIGNRWQILDRDLDGKVTPEEVASAAAYLKDTIGK 732
Query: 667 ELNMELPSGGSE 702
E EL S S+
Sbjct: 733 EGVQELVSNLSK 744
>01_06_1546 + 38147846-38147853,38148413-38148986,38149160-38150011
Length = 477
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 646 VADEAGLELNMELPSGGSEHIYWYRNWCFPE 738
+ADE L+ + P+ IYW+R W PE
Sbjct: 442 LADEP-LDYSFGFPAWSRVSIYWHRKWRLPE 471
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,274,431
Number of Sequences: 37544
Number of extensions: 307449
Number of successful extensions: 786
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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