Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4907
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0158 + 32052426-32052529,32052645-32052702,32052847-320529...    31   0.81 

>03_06_0158 +
           32052426-32052529,32052645-32052702,32052847-32052983,
           32053824-32053899,32053965-32054017,32054415-32054896,
           32055097-32055184,32055482-32055665,32056443-32056640,
           32057351-32057534,32057982-32058109,32058236-32058317,
           32058444-32058496,32058625-32058700,32059253-32059314
          Length = 654

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 475 RPPNKEIKRNGKKNEMESLNLIFIDLKTSDEFENLHSHRVPLTILLFYN--FALI 633
           R P    K  G KNE    N +     TSD  + +HS+RV    ++F+N  FAL+
Sbjct: 387 RDPAGLQKLTGMKNE--DWNTMISHATTSDPGDEIHSYRVEKNTIIFFNDFFALV 439


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,383,781
Number of Sequences: 37544
Number of extensions: 339848
Number of successful extensions: 593
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)