Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4906
         (497 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    25   0.58 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.4  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -1

Query: 182 CIYKWQSW-----PLTLIRKSHDFEFRCYVSNFEFQIYYF 78
           C+ KW SW      L L ++S   +   Y +N EF +  F
Sbjct: 145 CVLKWASWTYDGYQLELEKQSEQGDVSNYQANGEFDLVNF 184


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 DYRCDIYLFSIVFFFVC 380
           D   D+Y F I+F+++C
Sbjct: 771 DSSVDVYAFGILFWYLC 787


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 DYRCDIYLFSIVFFFVC 380
           D   D+Y F I+F+++C
Sbjct: 809 DSSVDVYAFGILFWYLC 825


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 329 ITDGNISPTDLHSLKVVLKIVWLPRTLTKFIRATETKL 216
           + +GN +    +  + +L I   PRTLT  I A + +L
Sbjct: 472 VNEGNNNMAATYMNECLLNIQKSPRTLTLGIFAEKLRL 509


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,060
Number of Sequences: 438
Number of extensions: 1881
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)