Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4904
(738 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ787088-1|ABG79574.1| 266|Homo sapiens angiotonin transactivat... 52 2e-06
BC014204-1|AAH14204.1| 268|Homo sapiens transmembrane protein 1... 52 2e-06
BC000623-1|AAH00623.1| 268|Homo sapiens transmembrane protein 1... 52 2e-06
AK000218-1|BAA91017.1| 250|Homo sapiens protein ( Homo sapiens ... 50 7e-06
BC101073-1|AAI01074.1| 841|Homo sapiens SLIT and NTRK-like fami... 30 10.0
BC101072-1|AAI01073.1| 841|Homo sapiens SLIT and NTRK-like fami... 30 10.0
BC101071-1|AAI01072.1| 841|Homo sapiens SLIT and NTRK-like fami... 30 10.0
BC101070-1|AAI01071.1| 841|Homo sapiens SLIT and NTRK-like fami... 30 10.0
>DQ787088-1|ABG79574.1| 266|Homo sapiens angiotonin transactivated
protein 1 protein.
Length = 266
Score = 52.0 bits (119), Expect = 2e-06
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Frame = +3
Query: 81 DGSFIVNCVISYCIKQNSPLLIVSSHNSITHYHNVGLRMNHNLFKSCEAGVIDYFDFGDA 260
DGSF+V+ +S+ +K N + V+ S +HY VG ++ +L + E G + + + G
Sbjct: 30 DGSFLVHHFLSFYLKANCKVCFVALIQSFSHYSIVGQKLGVSLTMARERGQLVFLE-GLK 88
Query: 261 TLTNIMEYAESD-------------------QLLIDVLKKIEEMQRNHNTVNIIFDGITH 383
+ +++ A+ + + + + LK ++ + ++ D ++
Sbjct: 89 SAVDVVFQAQKEPHPLQFLREANAGNLKPLFEFVREALKPVDSGEARWTYPVLLVDDLSV 148
Query: 384 LLDLQYTLQEVNKF---CSEIIEIAAKSKNPFVIFHCNDVMEDDANHCLANLLSHKAQTV 554
LL L V F C + K N V+ H + ED+ N L N LSH++ +
Sbjct: 149 LLSLGMGAVAVLDFIHYCRATVCWELKG-NMVVLVHDSGDAEDEENDILLNGLSHQSHLI 207
Query: 555 VEVENLSSGLSSDVSGHLTI 614
+ E L++G DV G L I
Sbjct: 208 LRAEGLATGFCRDVHGQLRI 227
>BC014204-1|AAH14204.1| 268|Homo sapiens transmembrane protein 103
protein.
Length = 268
Score = 52.0 bits (119), Expect = 2e-06
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Frame = +3
Query: 81 DGSFIVNCVISYCIKQNSPLLIVSSHNSITHYHNVGLRMNHNLFKSCEAGVIDYFDFGDA 260
DGSF+V+ +S+ +K N + V+ S +HY VG ++ +L + E G + + + G
Sbjct: 30 DGSFLVHHFLSFYLKANCKVCFVALIQSFSHYSIVGQKLGVSLTMARERGQLVFLE-GLK 88
Query: 261 TLTNIMEYAESD-------------------QLLIDVLKKIEEMQRNHNTVNIIFDGITH 383
+ +++ A+ + + + + LK ++ + ++ D ++
Sbjct: 89 SAVDVVFQAQKEPHPLQFLREANAGNLKPLFEFVREALKPVDSGEARWTYPVLLVDDLSV 148
Query: 384 LLDLQYTLQEVNKF---CSEIIEIAAKSKNPFVIFHCNDVMEDDANHCLANLLSHKAQTV 554
LL L V F C + K N V+ H + ED+ N L N LSH++ +
Sbjct: 149 LLSLGMGAVAVLDFIHYCRATVCWELKG-NMVVLVHDSGDAEDEENDILLNGLSHQSHLI 207
Query: 555 VEVENLSSGLSSDVSGHLTI 614
+ E L++G DV G L I
Sbjct: 208 LRAEGLATGFCRDVHGQLRI 227
>BC000623-1|AAH00623.1| 268|Homo sapiens transmembrane protein 103
protein.
Length = 268
Score = 52.0 bits (119), Expect = 2e-06
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Frame = +3
Query: 81 DGSFIVNCVISYCIKQNSPLLIVSSHNSITHYHNVGLRMNHNLFKSCEAGVIDYFDFGDA 260
DGSF+V+ +S+ +K N + V+ S +HY VG ++ +L + E G + + + G
Sbjct: 30 DGSFLVHHFLSFYLKANCKVCFVALIQSFSHYSIVGQKLGVSLTMARERGQLVFLE-GLK 88
Query: 261 TLTNIMEYAESD-------------------QLLIDVLKKIEEMQRNHNTVNIIFDGITH 383
+ +++ A+ + + + + LK ++ + ++ D ++
Sbjct: 89 SAVDVVFQAQKEPHPLQFLREANAGNLKPLFEFVREALKPVDSGEARWTYPVLLVDDLSV 148
Query: 384 LLDLQYTLQEVNKF---CSEIIEIAAKSKNPFVIFHCNDVMEDDANHCLANLLSHKAQTV 554
LL L V F C + K N V+ H + ED+ N L N LSH++ +
Sbjct: 149 LLSLGMGAVAVLDFIHYCRATVCWELKG-NMVVLVHDSGDAEDEENDILLNGLSHQSHLI 207
Query: 555 VEVENLSSGLSSDVSGHLTI 614
+ E L++G DV G L I
Sbjct: 208 LRAEGLATGFCRDVHGQLRI 227
>AK000218-1|BAA91017.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ20211 fis, clone COLF1807. ).
Length = 250
Score = 50.4 bits (115), Expect = 7e-06
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Frame = +3
Query: 81 DGSFIVNCVISYCIKQNSPLLIVSSHNSITHYHNVGLRMNHNLFKSCEAGVIDYFDFGDA 260
DGSF+V+ +S+ +K N + V+ S +HY VG ++ +L + E G + + + G
Sbjct: 30 DGSFLVHHFLSFYLKANCKVCFVALIQSFSHYSIVGQKLGVSLTMARERGQLVFLE-GLK 88
Query: 261 TLTNIMEYAESD-------------------QLLIDVLKKIEEMQRNHNTVNIIFDGITH 383
+ +++ A+ + + + + LK ++ + ++ D ++
Sbjct: 89 SAVDVVFQAQKEPHPLQFLREANAGNLKPLFEFVREALKPVDSGEARWTYPVLLVDDLSV 148
Query: 384 LLDLQYTLQEVNKF---CSEIIEIAAKSKNPFVIFHCNDVMEDDANHCLANLLSHKAQTV 554
LL L V F C + K N V+ H + ED+ N L N LSH++ +
Sbjct: 149 LLSLGMGAVAVLDFIHYCRATVCWELKG-NMVVLVHDSGDAEDEENDILLNGLSHQSHLI 207
Query: 555 VEVENLSSGLSSDVSGHLTIKYPGN 629
+ E L++G DV G + GN
Sbjct: 208 LRAEGLATGFCRDVHGQVCRGLLGN 232
>BC101073-1|AAI01074.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 29.9 bits (64), Expect = 10.0
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Frame = +3
Query: 81 DGSFIVNCVISYCIKQNSPLLIVSSHNSITHYHNVGLRMNH-NLFKSCEAGVIDYFDFGD 257
DG+ ++NC IK S + + S N GL M H N F + + F
Sbjct: 41 DGTMLINCEAKG-IKMVSEISVPPSRPFQLSLLNNGLTMLHTNDFSGLTNAISIHLGFN- 98
Query: 258 ATLTNIMEYAESDQLLIDVLKKIEEMQRNHNTVNIIFDGITHLLDLQYTLQEVNKFCSEI 437
NI A+ + + L ++++ NHN++ I+ + H L+ LQ N F + +
Sbjct: 99 ----NI---ADIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFIT-V 150
Query: 438 IEIAAKSK-NPFVIFHCND 491
IE +A SK N + ND
Sbjct: 151 IEPSAFSKLNRLKVLILND 169
>BC101072-1|AAI01073.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 29.9 bits (64), Expect = 10.0
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Frame = +3
Query: 81 DGSFIVNCVISYCIKQNSPLLIVSSHNSITHYHNVGLRMNH-NLFKSCEAGVIDYFDFGD 257
DG+ ++NC IK S + + S N GL M H N F + + F
Sbjct: 41 DGTMLINCEAKG-IKMVSEISVPPSRPFQLSLLNNGLTMLHTNDFSGLTNAISIHLGFN- 98
Query: 258 ATLTNIMEYAESDQLLIDVLKKIEEMQRNHNTVNIIFDGITHLLDLQYTLQEVNKFCSEI 437
NI A+ + + L ++++ NHN++ I+ + H L+ LQ N F + +
Sbjct: 99 ----NI---ADIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFIT-V 150
Query: 438 IEIAAKSK-NPFVIFHCND 491
IE +A SK N + ND
Sbjct: 151 IEPSAFSKLNRLKVLILND 169
>BC101071-1|AAI01072.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 29.9 bits (64), Expect = 10.0
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Frame = +3
Query: 81 DGSFIVNCVISYCIKQNSPLLIVSSHNSITHYHNVGLRMNH-NLFKSCEAGVIDYFDFGD 257
DG+ ++NC IK S + + S N GL M H N F + + F
Sbjct: 41 DGTMLINCEAKG-IKMVSEISVPPSRPFQLSLLNNGLTMLHTNDFSGLTNAISIHLGFN- 98
Query: 258 ATLTNIMEYAESDQLLIDVLKKIEEMQRNHNTVNIIFDGITHLLDLQYTLQEVNKFCSEI 437
NI A+ + + L ++++ NHN++ I+ + H L+ LQ N F + +
Sbjct: 99 ----NI---ADIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFIT-V 150
Query: 438 IEIAAKSK-NPFVIFHCND 491
IE +A SK N + ND
Sbjct: 151 IEPSAFSKLNRLKVLILND 169
>BC101070-1|AAI01071.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 29.9 bits (64), Expect = 10.0
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Frame = +3
Query: 81 DGSFIVNCVISYCIKQNSPLLIVSSHNSITHYHNVGLRMNH-NLFKSCEAGVIDYFDFGD 257
DG+ ++NC IK S + + S N GL M H N F + + F
Sbjct: 41 DGTMLINCEAKG-IKMVSEISVPPSRPFQLSLLNNGLTMLHTNDFSGLTNAISIHLGFN- 98
Query: 258 ATLTNIMEYAESDQLLIDVLKKIEEMQRNHNTVNIIFDGITHLLDLQYTLQEVNKFCSEI 437
NI A+ + + L ++++ NHN++ I+ + H L+ LQ N F + +
Sbjct: 99 ----NI---ADIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFIT-V 150
Query: 438 IEIAAKSK-NPFVIFHCND 491
IE +A SK N + ND
Sbjct: 151 IEPSAFSKLNRLKVLILND 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,063,077
Number of Sequences: 237096
Number of extensions: 1963198
Number of successful extensions: 7722
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7716
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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