Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4900
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 281 3e-76
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 166 1e-41
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 165 2e-41
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 117 8e-27
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 117 8e-27
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 101 3e-22
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 101 3e-22
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 94 9e-20
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 94 9e-20
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 88 4e-18
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 87 1e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 85 4e-17
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 81 5e-16
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 81 9e-16
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 78 6e-15
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 75 4e-14
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 66 3e-11
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 65 5e-11
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 60 2e-09
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 58 7e-09
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 55 5e-08
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 53 2e-07
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 44 7e-05
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 39 0.003
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 1.2
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 5.0
Z46793-1|CAA86770.1| 367|Caenorhabditis elegans Hypothetical pr... 28 6.7
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 6.7
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 6.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 6.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 6.7
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 6.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 6.7
Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical ... 27 8.8
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 281 bits (689), Expect = 3e-76
Identities = 127/187 (67%), Positives = 152/187 (81%)
Frame = +3
Query: 93 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKA 272
S +S ALRAL +E K+LQ +PVEGF + + EDNLF W V I+GPP TLYQGGYFKA
Sbjct: 3 SKASTSSGALRALTMELKNLQSQPVEGFTIDV-NEDNLFVWTVGIYGPPKTLYQGGYFKA 61
Query: 273 HMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSV 452
++FP +YPYSPPS++F TKVWHPNVYENGDLCISILH P+DDPQSGEL CERWNPTQSV
Sbjct: 62 SIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSV 121
Query: 453 RTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVARMEAEKEG 632
RT+LLSVISLLNEPNT SPANVDASVMYR+W++ +D EY I+ KQ + ++ A+K+G
Sbjct: 122 RTILLSVISLLNEPNTSSPANVDASVMYRKWKED--QDPEYAKIVTKQVEESKKVAQKDG 179
Query: 633 IVVPLTL 653
I VP T+
Sbjct: 180 IQVPETI 186
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 166 bits (403), Expect = 1e-41
Identities = 78/160 (48%), Positives = 103/160 (64%), Gaps = 1/160 (0%)
Frame = +3
Query: 117 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 296
AL+ L EYK L P EG + EDN FEWE I GP +T + G F A + FP DY
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 297 PYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVI 476
P SPP +RF ++HPN+Y +G +CISILH P DDP EL ERW+P QS+ +LLSV+
Sbjct: 65 PLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVV 124
Query: 477 SLLNEPNTFSPANVDASVMYRRWRDSKGK-DKEYENIIRK 593
S+L EPN SPANV A+ M WR+ + + +K ++++RK
Sbjct: 125 SMLAEPNDESPANVSAAKM---WREDRAQFEKIADSLVRK 161
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 165 bits (402), Expect = 2e-41
Identities = 69/137 (50%), Positives = 99/137 (72%)
Frame = +3
Query: 129 LALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSP 308
L + ++ PV+GF L+ ++++++WEV + GPPDTLY+GG+FKA + FP DYP P
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 309 PSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLN 488
P ++F++++WHPN+ + G++CISILH P DD E P ERW P +V T+LLSVIS+L
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127
Query: 489 EPNTFSPANVDASVMYR 539
+PN SPANVDA+ M R
Sbjct: 128 DPNFESPANVDAAKMQR 144
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 117 bits (281), Expect = 8e-27
Identities = 65/179 (36%), Positives = 101/179 (56%), Gaps = 1/179 (0%)
Frame = +3
Query: 108 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 287
T+ + R L ++K LQE+P G EDN+ WE IFGP +T ++ G FK ++F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 288 PDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLL 467
+YP PP+++F++K++HPNVY +G +C+ IL RW+PT V +L
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQ-------------NRWSPTYDVAAILT 107
Query: 468 SVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVARME-AEKEGIVV 641
S+ SLL+EPN SPAN A+ +Y+ R +EYE +++ + + + E EG V
Sbjct: 108 SIQSLLDEPNPNSPANSLAAQLYQENR------REYEKRVQQIVEQSWLNFGENEGDAV 160
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 117 bits (281), Expect = 8e-27
Identities = 65/179 (36%), Positives = 101/179 (56%), Gaps = 1/179 (0%)
Frame = +3
Query: 108 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 287
T+ + R L ++K LQE+P G EDN+ WE IFGP +T ++ G FK ++F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 288 PDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLL 467
+YP PP+++F++K++HPNVY +G +C+ IL RW+PT V +L
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQ-------------NRWSPTYDVAAILT 107
Query: 468 SVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVARME-AEKEGIVV 641
S+ SLL+EPN SPAN A+ +Y+ R +EYE +++ + + + E EG V
Sbjct: 108 SIQSLLDEPNPNSPANSLAAQLYQENR------REYEKRVQQIVEQSWLNFGENEGDAV 160
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 101 bits (243), Expect = 3e-22
Identities = 50/145 (34%), Positives = 79/145 (54%)
Frame = +3
Query: 117 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 296
AL+ + E + L +P +G+D LF W+ I GPP++ YQGG F + FP DY
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 297 PYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVI 476
P+ PP + F T+++HPN+ NG +C+ IL +W+P ++ VLLS+
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSIC 107
Query: 477 SLLNEPNTFSPANVDASVMYRRWRD 551
SLL +PN P + + +Y+ R+
Sbjct: 108 SLLCDPNPDDPLVPEIARIYKTDRE 132
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 101 bits (243), Expect = 3e-22
Identities = 50/145 (34%), Positives = 79/145 (54%)
Frame = +3
Query: 117 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 296
AL+ + E + L +P +G+D LF W+ I GPP++ YQGG F + FP DY
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 297 PYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVI 476
P+ PP + F T+++HPN+ NG +C+ IL +W+P ++ VLLS+
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSIC 107
Query: 477 SLLNEPNTFSPANVDASVMYRRWRD 551
SLL +PN P + + +Y+ R+
Sbjct: 108 SLLCDPNPDDPLVPEIARIYKTDRE 132
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 93.9 bits (223), Expect = 9e-20
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Frame = +3
Query: 129 LALEYKSLQEEPVEGFRVKLL----GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 296
LA E K +++ GF K + G NLF WE AI G DT+++GG ++ M F D+
Sbjct: 9 LAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDF 68
Query: 297 PYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVI 476
P +PP +F ++HPNVY +G +C+S+L D W P+ S++ +L+ +
Sbjct: 69 PSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQLLIGIQ 117
Query: 477 SLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQA 599
LLN PN PA +A +Y + R EYE ++K+A
Sbjct: 118 DLLNHPNIEDPAQAEAYQIYCQNR------AEYEKRVKKEA 152
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 93.9 bits (223), Expect = 9e-20
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Frame = +3
Query: 129 LALEYKSLQEEPVEGFRVKLL----GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 296
LA E K +++ GF K + G NLF WE AI G DT+++GG ++ M F D+
Sbjct: 9 LAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDF 68
Query: 297 PYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVI 476
P +PP +F ++HPNVY +G +C+S+L D W P+ S++ +L+ +
Sbjct: 69 PSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQLLIGIQ 117
Query: 477 SLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQA 599
LLN PN PA +A +Y + R EYE ++K+A
Sbjct: 118 DLLNHPNIEDPAQAEAYQIYCQNR------AEYEKRVKKEA 152
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 88.2 bits (209), Expect = 4e-18
Identities = 53/163 (32%), Positives = 76/163 (46%)
Frame = +3
Query: 114 SALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPD 293
SA R L E L+ V+ + E NL +W V + P Y G FK + FP D
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVD 60
Query: 294 YPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSV 473
YP+ PP + F TK++HPNV E G C+ I + E W P V++++
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLPI------------VTAENWKPATKTEQVMMAL 108
Query: 474 ISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQ 602
+SL+NEP P D + ++ +D K K E RK A+
Sbjct: 109 LSLINEPEPSHPIRADVAEEFQ--KDHKKFMKTAEEHTRKHAE 149
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 87.0 bits (206), Expect = 1e-17
Identities = 46/139 (33%), Positives = 73/139 (52%)
Frame = +3
Query: 123 RALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPY 302
R + E + L +PV G E N + V I GP D+ + GG FK + P +YP
Sbjct: 7 RRIIKETQRLLADPVPGISANP-DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPM 65
Query: 303 SPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISL 482
+ P +RF+TK++HPN+ + G +C+ IL ++W+P +RTVLLS+ +L
Sbjct: 66 AAPKVRFMTKIYHPNIDKLGRICLDILK-------------DKWSPALQIRTVLLSIQAL 112
Query: 483 LNEPNTFSPANVDASVMYR 539
L+ PN P D + ++
Sbjct: 113 LSAPNPEDPLATDVAEQWK 131
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 85.0 bits (201), Expect = 4e-17
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Frame = +3
Query: 171 GFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV 350
G +++L E NL E + I GPPDT Y GG F +K P YP+SPP+++F TK+WHPNV
Sbjct: 26 GIMIEILNE-NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNV 84
Query: 351 -YENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDAS 527
+ G +C+ IL ++W + ++RTVLLS+ +L+ P P + +
Sbjct: 85 SSQTGVICLDILK-------------DQWAASLTLRTVLLSIQALMCTPEPKDPQDAVVA 131
Query: 528 VMY 536
Y
Sbjct: 132 KQY 134
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 81.4 bits (192), Expect = 5e-16
Identities = 43/137 (31%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
Frame = +3
Query: 147 SLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFL 326
+L+++ + + +++ L E E+ + P + +Y+GG F+ + PP+Y PP ++ L
Sbjct: 39 ALRDQKQKLWHLEVPSTSCLHELELTVT-PQEGIYRGGKFRFKITVPPEYNNVPPVVKCL 97
Query: 327 TKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFS 506
TKVWHPN+ E+G +C+SIL + L W PT+++ V+ ++SL N+ F+
Sbjct: 98 TKVWHPNINEDGSICLSIL-------RQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFN 150
Query: 507 PA-NVDASVMYRRWRDS 554
A N+ A+ M+ + R+S
Sbjct: 151 DALNIQAAQMWSQNRES 167
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 80.6 bits (190), Expect = 9e-16
Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Frame = +3
Query: 108 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 287
+SSA+R L +Y L ++PV+G + L EDN+ EW + G PDT + GGY+ + F
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFK 75
Query: 288 PDYPYSPPSIRFLTKVWHPNVYENGDLCISI--LHPPVDDPQSGELPCERWNPTQSVRTV 461
++P+SPP+I +T + N LC+SI HP E WNP +V +
Sbjct: 76 ENFPWSPPAITMITP--NGRFQTNTRLCLSISDYHP------------ESWNPGWTVSAI 121
Query: 462 LLSVISLLNE 491
L+ + S +NE
Sbjct: 122 LIGLHSFMNE 131
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 77.8 bits (183), Expect = 6e-15
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Frame = +3
Query: 117 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 296
AL+ L +Y+ L +EPV + L E N+ EW I G P T Y+GG + + FP D+
Sbjct: 9 ALQRLKKDYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDF 67
Query: 297 PYSPPSIRFLTKVWHPNVYENGDLCISI--LHPPVDDPQSGELPCERWNPTQSVRTVLLS 470
P+ PP+I LT + N LC+SI HP + WNP +V T++
Sbjct: 68 PFKPPAILMLTP--NGRFQTNTRLCLSISDYHP------------DTWNPAWTVSTIITG 113
Query: 471 VISLL--NEPNTFS--PANVDASVMYRRWRDSKGKDKEYENIIRKQAQVARMEAEK 626
++S + N+P S + + ++ ++ + KDK + + ++A R E EK
Sbjct: 114 LMSFMNDNQPTLGSLVTSESERKLLAKKSKQWNLKDKSFCALFPEEADQIREEMEK 169
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 74.9 bits (176), Expect = 4e-14
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = +3
Query: 108 TSSALRALALEYKSLQEEPVEGFRVKLLGEDN-LFEWEVAIFGPPDTLYQGGYFKAHMKF 284
+ +A R L E L+ E EG V N L +W++ + G TLY G F F
Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTF 61
Query: 285 PPDYPYSPPSIRFL--TKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRT 458
P YP++ P + F+ T HP++Y NG +C+SIL DD W P SV++
Sbjct: 62 GPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILS---DD----------WTPALSVQS 108
Query: 459 VLLSVISLLN 488
V LS++S+L+
Sbjct: 109 VCLSILSMLS 118
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 65.7 bits (153), Expect = 3e-11
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = +3
Query: 90 MSNTVPTSSA-LRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYF 266
MS T +A +R L E L++ P E + + + EDNLFEW I G T ++GG +
Sbjct: 1 MSEQYNTKNAGVRRLMKEAMELRQ-PTEMYHAQPM-EDNLFEWHFTIRGTLGTDFEGGIY 58
Query: 267 KAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQ 446
+ FP DYP PP++ LT + N +C+SI SG P E W P+
Sbjct: 59 HGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSI---------SGYHP-ETWLPSW 106
Query: 447 SVRTVLLSVISLL 485
S+RT LL++I L
Sbjct: 107 SIRTALLALIGFL 119
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 64.9 bits (151), Expect = 5e-11
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Frame = +3
Query: 216 EVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK-----VWHPNVYENGDLCISI 380
+V I GP DT Y G F+ + FP YP+SPP FLT ++PN+Y +G +C+SI
Sbjct: 446 KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSI 505
Query: 381 LHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNE 491
L P+ E+WNP S+ VL+S+ ++ +
Sbjct: 506 LGTWEGRPE------EKWNPYCSLMQVLVSIQEVIEK 536
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +3
Query: 210 EWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCISILH 386
E+ V GP DT Y+ G ++ + P YP+ PSI FL K++HPN+ E +G +C+ +++
Sbjct: 34 EFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
Query: 387 PPVDDPQSGELPCERWNPTQSVRTVLLSVI-SLLNEPNTFSPANVDASVMY 536
+ W + + + + LL PN P N +A+ +Y
Sbjct: 94 -------------QAWTALYDLTNIFDTFLPQLLTYPNAADPLNGEAARLY 131
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 57.6 bits (133), Expect = 7e-09
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
Frame = +3
Query: 195 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI---------------RFLT 329
E+NL + + I GP T Y GG F+ + P YP+ PP + +F+T
Sbjct: 47 ENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVT 106
Query: 330 KVWHPNV-YENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFS 506
++WHPN+ + G +C+ IL ++W + ++RTVLLS+ ++L P
Sbjct: 107 RIWHPNISSQTGTICLDILK-------------DKWTASLTLRTVLLSLQAMLCSPEPSD 153
Query: 507 P 509
P
Sbjct: 154 P 154
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/97 (34%), Positives = 48/97 (49%)
Frame = +3
Query: 246 LYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPC 425
LY+ F + +YP+ PP ++F V+HPNV P + S L
Sbjct: 56 LYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNV-----------DPVTCELCSPMLLQ 104
Query: 426 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 536
E W P ++ VLL++I LLNEP+ P N+DA+ Y
Sbjct: 105 ENWKPETTMEDVLLNLIVLLNEPDLSRPVNIDAAHDY 141
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 54.8 bits (126), Expect = 5e-08
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +3
Query: 87 TMSNTVPTSSALRALALEYKSLQEEP-VEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGY 263
T T P + ++ +++ ++L EEP V + + + I G +T Y+GG
Sbjct: 338 TRPETKPKITPMKVISVTPQNLPEEPNVSETNIVTVKFRLPKGIQGIIKGVEETPYEGGI 397
Query: 264 FKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCISILHPPVDDPQSGELPCERWNP 440
F+ +K YP+ P+++F+TK+WHP+V +G +C LH D +G W
Sbjct: 398 FELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTIC---LH----DVDNGV-----WPV 445
Query: 441 TQSVRTVLLSVISLLNEPNTFSPANVD 521
+ ++ VL+ + S ++ N P +V+
Sbjct: 446 SMTIYKVLIVIQSWMSNFNEKEPIDVE 472
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 53.2 bits (122), Expect = 2e-07
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 5/186 (2%)
Frame = +3
Query: 93 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLL---GEDNLFEWEVAIFGPPDTLYQGGY 263
+N+ ++ + + E E +G+ K + G D W + GP + ++GG
Sbjct: 28 TNSREFTNEINTVKEEKAKWDERTPQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGE 87
Query: 264 FKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPT 443
++ + F +P PP F T + HPNV G + + +L E W+
Sbjct: 88 YEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQ------------EHWSSE 134
Query: 444 QSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDS-KGKDKEYENIIRKQAQVARME- 617
S++ +L + +LL P+ AN++A + Y R++ + K + Y + A V ME
Sbjct: 135 TSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWTVNPNA-VGYMEV 193
Query: 618 AEKEGI 635
+E GI
Sbjct: 194 SENSGI 199
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 195 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWH 341
ED + +A GP DT Y+ G F+ + FP +YP + P I+F T +W+
Sbjct: 27 EDKKITFHIA--GPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWN 73
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 204 LFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 335
L W +I GPP T Y+ + ++ +YP PP++RF TKV
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKV 81
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 117 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYF 266
AL+ + E L +P +G+D L+ W+ I GPP++ YQGG F
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDD-LYHWQATIMGPPESPYQGGIF 50
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 226 IATSHSNRLSSPSNLTRKPSTGSSCRLLYSNAKALRAELV 107
+ +SN + SP+N +TG+SC +L+S+ K A V
Sbjct: 12 VGQPYSNLVISPNNRILATTTGASCEVLFSDKKGNDARRV 51
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 29.1 bits (62), Expect = 2.9
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 5/136 (3%)
Frame = +3
Query: 237 PDTLYQGGYFKAHMKF-----PPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDD 401
PDT G A K PP P +PP ++F K N++ GD + P
Sbjct: 40 PDTTTSSGSRPASSKSNYHNEPPPPPANPPPLKFRFK----NLFNLGDQDVKKEEPSSMT 95
Query: 402 PQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYEN 581
P+S P S+ T S S + + +++ R+ + ++KE E
Sbjct: 96 PESSR-------PGSSLETPSSSSSSKHHHHHHKKERKDKEHKKHKKDREHRDREKERER 148
Query: 582 IIRKQAQVARMEAEKE 629
RK+ + + E E+E
Sbjct: 149 DERKERERQQKEKERE 164
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 258 GYFKAHMKFPPDYPYSPP 311
GY+ +PP YPY PP
Sbjct: 297 GYYPPGYPYPPGYPYPPP 314
>Z46793-1|CAA86770.1| 367|Caenorhabditis elegans Hypothetical
protein C56G7.2 protein.
Length = 367
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 177 RVKLLGEDNLFEWEVAIFGPPDTLYQ---GGYFKAHMKF 284
++KL+GE + EW +FG PD L G Y H KF
Sbjct: 61 KIKLIGESSQLEW---VFGIPDGLEYTDVGVYKIGHFKF 96
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 339 HPNVY---ENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFS 506
HPN+ ++G+ I I V Q+GEL CE NP S + + + + + TF+
Sbjct: 2410 HPNITVTDKDGEHTIEI--SAVTPEQAGELSCEATNPVGSKKRDVQLAVKKVGDAPTFA 2466
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 339 HPNVY---ENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFS 506
HPN+ ++G+ I I V Q+GEL CE NP S + + + + + TF+
Sbjct: 1770 HPNITVTDKDGEHTIEI--SAVTPEQAGELSCEATNPVGSKKRDVQLAVKKVGDAPTFA 1826
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 339 HPNVY---ENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFS 506
HPN+ ++G+ I I V Q+GEL CE NP S + + + + + TF+
Sbjct: 2410 HPNITVTDKDGEHTIEI--SAVTPEQAGELSCEATNPVGSKKRDVQLAVKKVGDAPTFA 2466
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 339 HPNVY---ENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFS 506
HPN+ ++G+ I I V Q+GEL CE NP S + + + + + TF+
Sbjct: 2410 HPNITVTDKDGEHTIEI--SAVTPEQAGELSCEATNPVGSKKRDVQLAVKKVGDAPTFA 2466
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 339 HPNVY---ENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFS 506
HPN+ ++G+ I I V Q+GEL CE NP S + + + + + TF+
Sbjct: 1770 HPNITVTDKDGEHTIEI--SAVTPEQAGELSCEATNPVGSKKRDVQLAVKKVGDAPTFA 1826
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 339 HPNVY---ENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFS 506
HPN+ ++G+ I I V Q+GEL CE NP S + + + + + TF+
Sbjct: 2410 HPNITVTDKDGEHTIEI--SAVTPEQAGELSCEATNPVGSKKRDVQLAVKKVGDAPTFA 2466
>Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical
protein F34D10.4 protein.
Length = 692
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 178 RKPSTGSSCRLLYSNAKALRAELVGTV 98
R PSTG+ CR N + LR E + T+
Sbjct: 74 RSPSTGAICRGTVENMRQLRLERMKTI 100
>AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical
protein F25E5.8b protein.
Length = 176
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -2
Query: 214 HSNRLSSPSNLTRKPSTGSSCRLLYSNAKALRAELVGTVLDIVSYVFI 71
HS + S S RK STGS C S + + + VSY+F+
Sbjct: 124 HSKQNSGASTPARKNSTGSECPC--SKQEQCHKHSINITVGAVSYLFL 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,860,434
Number of Sequences: 27780
Number of extensions: 364277
Number of successful extensions: 1032
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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