Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4900
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   3.4  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   3.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   3.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   3.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   7.9  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 214 HSNRLSSPSNLTRKPSTGSSCR 149
           H N+ S P+ L R   T + CR
Sbjct: 39  HGNKSSGPNELGRFKHTDACCR 60


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 511 AGLKVFGSLRSEITERSTVRTDCVGFQR 428
           +GLKV   +  ++ ER   +TD V F++
Sbjct: 118 SGLKVIACIGEKLEEREAGKTDEVVFRQ 145


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 214 HSNRLSSPSNLTRKPSTGSSCR 149
           H N+ S P+ L R   T + CR
Sbjct: 44  HGNKSSGPNELGRFKHTDACCR 65


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 214 HSNRLSSPSNLTRKPSTGSSCR 149
           H N+ S P+ L R   T + CR
Sbjct: 44  HGNKSSGPNELGRFKHTDACCR 65


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 368 LHIDSPPARG*SS 406
           LH+ SPPAR  SS
Sbjct: 673 LHLTSPPARSPSS 685


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 249 YQGGYFKAHMKFPPDYPY 302
           + G  F+  +KF P YP+
Sbjct: 305 FDGRLFEFPIKFVPSYPF 322


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,534
Number of Sequences: 438
Number of extensions: 4833
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)