Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4890
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 295 1e-80
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 295 1e-80
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 295 1e-80
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 295 1e-80
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 295 1e-80
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 295 1e-80
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 294 3e-80
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 292 9e-80
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 285 2e-77
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 256 6e-69
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 202 1e-52
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 184 5e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 184 5e-47
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 182 1e-46
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 177 6e-45
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 163 7e-41
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 129 1e-30
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 114 4e-26
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 77 8e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 8e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 8e-07
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 35 0.033
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.076
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.13
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.0
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.6
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 6.6
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 8.7
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 8.7
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 8.7
U28739-9|AAB93451.1| 480|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 295 bits (724), Expect = 1e-80
Identities = 135/137 (98%), Positives = 136/137 (99%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 425
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTPAMYVAI 476
TQIMFETFNTPAMYVAI
Sbjct: 121 TQIMFETFNTPAMYVAI 137
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTG+VLD GD
Sbjct: 138 QAVLSLYASGRTTGVVLDSGD 158
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 295 bits (724), Expect = 1e-80
Identities = 135/137 (98%), Positives = 136/137 (99%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 425
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTPAMYVAI 476
TQIMFETFNTPAMYVAI
Sbjct: 121 TQIMFETFNTPAMYVAI 137
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTG+VLD GD
Sbjct: 138 QAVLSLYASGRTTGVVLDSGD 158
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 295 bits (724), Expect = 1e-80
Identities = 135/137 (98%), Positives = 136/137 (99%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 425
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTPAMYVAI 476
TQIMFETFNTPAMYVAI
Sbjct: 121 TQIMFETFNTPAMYVAI 137
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTG+VLD GD
Sbjct: 138 QAVLSLYASGRTTGVVLDSGD 158
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 295 bits (724), Expect = 1e-80
Identities = 135/137 (98%), Positives = 136/137 (99%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 425
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTPAMYVAI 476
TQIMFETFNTPAMYVAI
Sbjct: 121 TQIMFETFNTPAMYVAI 137
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTG+VLD GD
Sbjct: 138 QAVLSLYASGRTTGVVLDSGD 158
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 295 bits (724), Expect = 1e-80
Identities = 135/137 (98%), Positives = 136/137 (99%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 425
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTPAMYVAI 476
TQIMFETFNTPAMYVAI
Sbjct: 121 TQIMFETFNTPAMYVAI 137
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTG+VLD GD
Sbjct: 138 QAVLSLYASGRTTGVVLDSGD 158
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 295 bits (724), Expect = 1e-80
Identities = 135/137 (98%), Positives = 136/137 (99%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 425
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTPAMYVAI 476
TQIMFETFNTPAMYVAI
Sbjct: 121 TQIMFETFNTPAMYVAI 137
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTG+VLD GD
Sbjct: 138 QAVLSLYASGRTTGVVLDSGD 158
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 294 bits (721), Expect = 3e-80
Identities = 134/137 (97%), Positives = 136/137 (99%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 425
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTPAMYVAI 476
TQIMFETFNTPAMYVAI
Sbjct: 121 TQIMFETFNTPAMYVAI 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTGIVLD GD
Sbjct: 138 QAVLSLYASGRTTGIVLDSGD 158
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 292 bits (717), Expect = 9e-80
Identities = 132/137 (96%), Positives = 136/137 (99%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 425
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTPAMYVAI 476
TQIMFETFNTPAMYVAI
Sbjct: 121 TQIMFETFNTPAMYVAI 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTGIVLD GD
Sbjct: 138 QAVLSLYASGRTTGIVLDSGD 158
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 285 bits (698), Expect = 2e-77
Identities = 129/135 (95%), Positives = 133/135 (98%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQSK 251
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 431
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 432 IMFETFNTPAMYVAI 476
IMFETFNTPAMYV I
Sbjct: 122 IMFETFNTPAMYVNI 136
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTGIVLD GD
Sbjct: 137 QAVLSLYASGRTTGIVLDTGD 157
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 256 bits (628), Expect = 6e-69
Identities = 117/119 (98%), Positives = 118/119 (99%)
Frame = +3
Query: 120 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHGIVT 299
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 300 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 476
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 123
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTG+VLD GD
Sbjct: 124 QAVLSLYASGRTTGVVLDSGD 144
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 202 bits (493), Expect = 1e-52
Identities = 92/93 (98%), Positives = 92/93 (98%)
Frame = +3
Query: 198 MVGMGQKDSYVXDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 377
MVGMGQKDSYV DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 378 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 476
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAI
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 93
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYASGRTTG+VLD GD
Sbjct: 94 QAVLSLYASGRTTGVVLDSGD 114
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 184 bits (447), Expect = 5e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKI 323
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 184 bits (447), Expect = 5e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKI 323
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 182 bits (444), Expect = 1e-46
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDMEKI 323
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 177 bits (430), Expect = 6e-45
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRGILTLKYPIEHGIVTNWDDM 314
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 163 bits (396), Expect = 7e-41
Identities = 69/128 (53%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQSKRGILTL 269
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++ +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 270 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 446
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 447 FNTPAMYV 470
FN PA+Y+
Sbjct: 131 FNVPALYI 138
Score = 40.7 bits (91), Expect = 7e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVLSLYA+GRTTG+VLD GD
Sbjct: 141 QAVLSLYATGRTTGVVLDSGD 161
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 129 bits (312), Expect = 1e-30
Identities = 64/132 (48%), Positives = 88/132 (66%), Gaps = 3/132 (2%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVXDEAQSKRGIL 263
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD V +E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 264 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 440
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 441 ETFNTPAMYVAI 476
E + ++YVA+
Sbjct: 129 EQYGFNSIYVAV 140
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDFGD 540
QAVL+LYA G TG+V+D GD
Sbjct: 141 QAVLTLYAQGLLTGVVVDSGD 161
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 114 bits (274), Expect = 4e-26
Identities = 61/150 (40%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 209
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 210 GQKDSYVXDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 386
D ++ DEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 387 EAPLNPKANREKMTQIMFETFNTPAMYVAI 476
E PLN NRE +IMFE+FN P +Y+A+
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAV 150
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 77.0 bits (181), Expect = 8e-15
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 17/150 (11%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDSYVXDEAQS 248
+EV+ LV D GS + GFAG++ P+ PS + + + + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 249 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 383
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 384 TEAPLNPKANREKMTQIMFETFNTPAMYVA 473
+E+ N +A REK+T+IMFE F PA Y++
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLS 158
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 50.4 bits (115), Expect = 8e-07
Identities = 36/138 (26%), Positives = 63/138 (45%)
Frame = +3
Query: 81 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQSKRGI 260
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 261 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 440
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 441 ETFNTPAMYVAIPSRALA 494
+ F ++ S +A
Sbjct: 116 DYFGFTEVHKTSASTLVA 133
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 50.4 bits (115), Expect = 8e-07
Identities = 36/138 (26%), Positives = 63/138 (45%)
Frame = +3
Query: 81 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAQSKRGI 260
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 261 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 440
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 441 ETFNTPAMYVAIPSRALA 494
+ F ++ S +A
Sbjct: 116 DYFGFTEVHKTSASTLVA 133
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 35.1 bits (77), Expect = 0.033
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +2
Query: 173 GKAPPSGRDGRYGTEGLLCXR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 352
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 193 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGA 249
Query: 353 CRPRGTPRPAY*GSPQPQG 409
P G P PA G+P P G
Sbjct: 250 AGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.076
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +2
Query: 173 GKAPPSGRDGRYGTEGLLCXR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 352
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 353 CRPRGTPRPAY*GSPQPQG 409
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.13
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -2
Query: 394 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSXT*ESF 215
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 214 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 71
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 120 KAGFAGDDAPRAVFPSIVGRPRHQG 194
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 305 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 195
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 174 GRPRHQGVMVGMGQKDSYVXD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 338
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 174 GRPRHQGVMVGMGQKDSYVXD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 338
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 273 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 374
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 273 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 374
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>U28739-9|AAB93451.1| 480|Caenorhabditis elegans Hypothetical
protein C17G10.1 protein.
Length = 480
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 497 YSESTAWNGDVHGGRVECFEHD 432
Y S W+ +V+GG ++ F HD
Sbjct: 169 YITSADWDSEVNGGDLQLFNHD 190
>AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical
protein W06H3.1 protein.
Length = 654
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 366 EHPVLLTEAPLNPKANREKMTQIMFE--TFNTPAMYVAIPSRALAVRVRSYH 515
E+P + + PLNP+ EK+T+ + T A VA ++ +R +H
Sbjct: 129 ENPYIGAKTPLNPQERNEKLTESLKNHLTQAEKATKVATSAKLETIRAIEHH 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,933,532
Number of Sequences: 27780
Number of extensions: 321150
Number of successful extensions: 1171
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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