Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4889
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49989-1|CAA90281.2|  461|Homo sapiens smoothelin-A protein.           31   5.7  
Y13492-1|CAA73884.2|  917|Homo sapiens smoothelin-B protein.           31   5.7  
BC034237-1|AAH34237.1|  915|Homo sapiens smoothelin protein.           31   5.7  
AY061972-1|AAL36150.1|  940|Homo sapiens smoothelin-B3 protein.        31   5.7  
AY061971-1|AAL36149.1|  915|Homo sapiens smoothelin-B2 protein.        31   5.7  
AJ010306-1|CAA09077.2|  917|Homo sapiens smoothelein L1, large i...    31   5.7  
AF115570-2|AAF03563.1|  461|Homo sapiens smoothelin-A protein.         31   5.7  
AF115570-1|AAF03562.1|  917|Homo sapiens smoothelin-B protein.         31   5.7  
AF064238-1|AAF01481.3|  915|Homo sapiens smoothelin large isofor...    31   5.7  
AC005005-3|AAD15619.1|  915|Homo sapiens WUGSC:H_DJ412A9.3 protein.    31   5.7  

>Z49989-1|CAA90281.2|  461|Homo sapiens smoothelin-A protein.
          Length = 461

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 114 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 173

Query: 287 KL 292
           +L
Sbjct: 174 RL 175


>Y13492-1|CAA73884.2|  917|Homo sapiens smoothelin-B protein.
          Length = 917

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 570 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 629

Query: 287 KL 292
           +L
Sbjct: 630 RL 631


>BC034237-1|AAH34237.1|  915|Homo sapiens smoothelin protein.
          Length = 915

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 570 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 629

Query: 287 KL 292
           +L
Sbjct: 630 RL 631


>AY061972-1|AAL36150.1|  940|Homo sapiens smoothelin-B3 protein.
          Length = 940

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 570 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 629

Query: 287 KL 292
           +L
Sbjct: 630 RL 631


>AY061971-1|AAL36149.1|  915|Homo sapiens smoothelin-B2 protein.
          Length = 915

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 570 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 629

Query: 287 KL 292
           +L
Sbjct: 630 RL 631


>AJ010306-1|CAA09077.2|  917|Homo sapiens smoothelein L1, large
           isoform protein.
          Length = 917

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 570 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 629

Query: 287 KL 292
           +L
Sbjct: 630 RL 631


>AF115570-2|AAF03563.1|  461|Homo sapiens smoothelin-A protein.
          Length = 461

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 114 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 173

Query: 287 KL 292
           +L
Sbjct: 174 RL 175


>AF115570-1|AAF03562.1|  917|Homo sapiens smoothelin-B protein.
          Length = 917

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 570 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 629

Query: 287 KL 292
           +L
Sbjct: 630 RL 631


>AF064238-1|AAF01481.3|  915|Homo sapiens smoothelin large isoform
           L2 protein.
          Length = 915

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 570 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 629

Query: 287 KL 292
           +L
Sbjct: 630 RL 631


>AC005005-3|AAD15619.1|  915|Homo sapiens WUGSC:H_DJ412A9.3 protein.
          Length = 915

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 116 KRPRGRSPKRWSDQISEQTSGLLSAALHQTTD---RNRWRLAVDKLKRSLTNEGAMEKKK 286
           K P GRSP    + ++ +  G+L   L Q+TD   R   R A+ +L++   ++   E+++
Sbjct: 570 KAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRDKERER 629

Query: 287 KL 292
           +L
Sbjct: 630 RL 631


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,213,304
Number of Sequences: 237096
Number of extensions: 2299574
Number of successful extensions: 4798
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4798
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)