Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4889
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052043-1|AAK93467.1|  704|Drosophila melanogaster LP05645p pro...    29   8.7  
AE014296-1543|AAF50352.1|  551|Drosophila melanogaster CG5735-PA...    29   8.7  
AE014296-1542|AAN11975.1|  704|Drosophila melanogaster CG5735-PD...    29   8.7  
AE014296-1541|AAF50351.1|  704|Drosophila melanogaster CG5735-PC...    29   8.7  
AE014296-1540|AAF50350.1|  704|Drosophila melanogaster CG5735-PB...    29   8.7  

>AY052043-1|AAK93467.1|  704|Drosophila melanogaster LP05645p
           protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 555 QNHVQRIPLHTNIRMNEKAY*KGSILSYSVFVLHHHHQQ 671
           Q H Q+   H   +  ++ +     LS ++  LHHHHQQ
Sbjct: 180 QQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQ 218


>AE014296-1543|AAF50352.1|  551|Drosophila melanogaster CG5735-PA,
           isoform A protein.
          Length = 551

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 555 QNHVQRIPLHTNIRMNEKAY*KGSILSYSVFVLHHHHQQ 671
           Q H Q+   H   +  ++ +     LS ++  LHHHHQQ
Sbjct: 27  QQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQ 65


>AE014296-1542|AAN11975.1|  704|Drosophila melanogaster CG5735-PD,
           isoform D protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 555 QNHVQRIPLHTNIRMNEKAY*KGSILSYSVFVLHHHHQQ 671
           Q H Q+   H   +  ++ +     LS ++  LHHHHQQ
Sbjct: 180 QQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQ 218


>AE014296-1541|AAF50351.1|  704|Drosophila melanogaster CG5735-PC,
           isoform C protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 555 QNHVQRIPLHTNIRMNEKAY*KGSILSYSVFVLHHHHQQ 671
           Q H Q+   H   +  ++ +     LS ++  LHHHHQQ
Sbjct: 180 QQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQ 218


>AE014296-1540|AAF50350.1|  704|Drosophila melanogaster CG5735-PB,
           isoform B protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 555 QNHVQRIPLHTNIRMNEKAY*KGSILSYSVFVLHHHHQQ 671
           Q H Q+   H   +  ++ +     LS ++  LHHHHQQ
Sbjct: 180 QQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQ 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,394,095
Number of Sequences: 53049
Number of extensions: 697742
Number of successful extensions: 1751
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)