Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4889
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   1.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   4.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   5.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.1  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 651 VQKQNSSVSNLFNTLSHSYVC*YVTESFEHD 559
           V ++NSS  NL NTL+  +   Y+   F++D
Sbjct: 22  VVRENSSGKNLTNTLNVIHKWKYLDYDFDND 52


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 645 KQNSSVSNLFNTLSHSYVC*YVTESFEHDFGPLQNPSKI 529
           K+N SV    +T    Y C     +FEH  G L    +I
Sbjct: 132 KENLSVHRRIHTKERPYKCDVCERAFEHS-GKLHRHMRI 169


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 639 SVFVLHHHHQQPTVVHCWR*ASPNLHH 719
           ++F  H   +QP+V    R  +P  HH
Sbjct: 56  TIFEGHDDREQPSVYPLLRFENPETHH 82


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 639 SVFVLHHHHQQPTVV 683
           S    HHHHQQ   V
Sbjct: 93  SAAAAHHHHQQQQAV 107


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 654 HHHHQQPTVVH 686
           HHHHQ  ++ H
Sbjct: 353 HHHHQTQSLQH 363


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 654 HHHHQQPTVV 683
           HHHH Q T V
Sbjct: 147 HHHHLQSTAV 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,959
Number of Sequences: 438
Number of extensions: 4421
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)