Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4885
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036536-1|AAH36536.1|  262|Homo sapiens tetratricopeptide repea...    30   9.0  
BC015701-1|AAH15701.1|  262|Homo sapiens tetratricopeptide repea...    30   9.0  
AF023244-1|AAD09341.1|  262|Homo sapiens osmosis responsive fact...    30   9.0  

>BC036536-1|AAH36536.1|  262|Homo sapiens tetratricopeptide repeat
           domain 33 protein.
          Length = 262

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 444 AVKLAEQK-RQWKQNWPIVSNTRRAHCGLGECVITINSYKNSLHL 575
           AV  AE   +Q   +W       RA  GLGE ++ I S++ +LH+
Sbjct: 112 AVHAAEMAVQQNPHSWESWQTLGRAQLGLGEIILAIRSFQVALHI 156


>BC015701-1|AAH15701.1|  262|Homo sapiens tetratricopeptide repeat
           domain 33 protein.
          Length = 262

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 444 AVKLAEQK-RQWKQNWPIVSNTRRAHCGLGECVITINSYKNSLHL 575
           AV  AE   +Q   +W       RA  GLGE ++ I S++ +LH+
Sbjct: 112 AVHAAEMAVQQNPHSWESWQTLGRAQLGLGEIILAIRSFQVALHI 156


>AF023244-1|AAD09341.1|  262|Homo sapiens osmosis responsive factor
           protein.
          Length = 262

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 444 AVKLAEQK-RQWKQNWPIVSNTRRAHCGLGECVITINSYKNSLHL 575
           AV  AE   +Q   +W       RA  GLGE ++ I S++ +LH+
Sbjct: 112 AVHAAEMAVQQNPHSWESWQTLGRAQLGLGEIILAIRSFQVALHI 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,954,597
Number of Sequences: 237096
Number of extensions: 1716682
Number of successful extensions: 3627
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3627
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)