Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4879
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.2  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    25   3.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.8  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 399  SNIKK*YFLQFTRIVDIIKINLLVEYLVHSGEYL 500
            SNI   YF+ F  +   + INL V  ++ + +YL
Sbjct: 1398 SNIAFPYFISFYVLCSFLIINLFVAVIMDNFDYL 1431


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 379 DQLPYIK*KNNYYAKLFFGSQCDAIPVEARVSARHCTL 266
           D LP I+  +  Y K+   S  D IP+ A +  +  +L
Sbjct: 226 DMLPEIRSSSEIYGKVKDSSVLDGIPISAILGNQQASL 263


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/45 (22%), Positives = 19/45 (42%)
 Frame = -1

Query: 220 IFGNYGLNYLLTALPPITLLGVYTDKPPPCLIVLRSKLASHFENS 86
           + GN     +   +P +  L  +  +PP C   L   +  H ++S
Sbjct: 379 LIGNLFAQTIRCCVPDLKSLREFVSRPPACSTRLHCTMIRHDDDS 423


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,724
Number of Sequences: 2352
Number of extensions: 15144
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)