Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4874
(707 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 24 1.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 24 1.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.6
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 24 1.6
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 24 1.6
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 3.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 3.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 3.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.7
AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 22 5.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.0
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 230 YLFNNYVFCCLLNYVINLYFYLRQS 304
YL Y+ CC+L V + F+L QS
Sbjct: 244 YLIQIYIPCCMLVIVSWVSFWLDQS 268
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 230 YLFNNYVFCCLLNYVINLYFYLRQS 304
YL Y+ CC+L V + F+L QS
Sbjct: 244 YLIQIYIPCCMLVIVSWVSFWLDQS 268
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 224 ILYLFNNYVFCCLLNYVINLYFYL 295
+ Y+FN + C L+N V L FY+
Sbjct: 214 MFYVFNLILPCILINSVALLVFYV 237
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +2
Query: 233 LFNNYVFCCLLNYVINLYFYLRQSYHF 313
++N Y++ ++ V+ YF++ S HF
Sbjct: 437 VYNGYIYQKMVADVVGDYFFICPSIHF 463
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +2
Query: 233 LFNNYVFCCLLNYVINLYFYLRQSYHF 313
++N Y++ ++ V+ YF++ S HF
Sbjct: 437 VYNGYIYQKMVADVVGDYFFICPSIHF 463
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 577 IGIYYFGKPPNSQDPLVNETKEVTRCLGISTSS 675
+ +YY PP S P ++ +++ R I S+
Sbjct: 119 VPVYYGNFPPRSMGPWISIQEQIPRFRHIGPST 151
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 577 IGIYYFGKPPNSQDPLVNETKEVTRCLGISTSS 675
+ +YY PP S P ++ +++ R I S+
Sbjct: 119 VPVYYGNFPPRSMGPWISIQEQIPRFRHIGPST 151
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 577 IGIYYFGKPPNSQDPLVNETKEVTRCLGISTSS 675
+ +YY PP S P ++ +++ R I S+
Sbjct: 119 VPVYYGNFPPRSMGPWISIQEQIPRFRHIGPST 151
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 577 IGIYYFGKPPNSQDPLVNETKEVTRCLGISTSS 675
+ +YY PP S P ++ +++ R I S+
Sbjct: 352 VPVYYGNFPPRSMGPWISIQEQIPRFRHIGPST 384
>AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein.
Length = 148
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 527 PANGSNSFVGFVFIHTGSVNPSLISGSLEAIFIT 426
P S++++GF+F+ V I S AI +T
Sbjct: 58 PVTNSDTYIGFLFVLGLIVPVFTIVSSYAAIVLT 91
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = -3
Query: 378 FNKYNKQTTRQFNTKWYY 325
+N YN +N K YY
Sbjct: 330 YNNYNNNNYNNYNKKLYY 347
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,349
Number of Sequences: 438
Number of extensions: 4463
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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