Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4869
         (660 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064574-1|AAH64574.1|  851|Homo sapiens LOC150763 protein protein.    30   8.4  
AK131197-1|BAD18392.1|  616|Homo sapiens 5).  protein.                 30   8.4  
AK122580-1|BAC56921.1|  233|Homo sapiens FLJ00202 protein protein.     30   8.4  

>BC064574-1|AAH64574.1|  851|Homo sapiens LOC150763 protein protein.
          Length = 851

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 539 YLNMLEAE*SWLNNTIALRKFSISISARHNRQGQHSLT 652
           +L+ L  E SWL   I LR F +  S +     QHSL+
Sbjct: 476 FLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLS 513


>AK131197-1|BAD18392.1|  616|Homo sapiens 5).  protein.
          Length = 616

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 539 YLNMLEAE*SWLNNTIALRKFSISISARHNRQGQHSLT 652
           +L+ L  E SWL   I LR F +  S +     QHSL+
Sbjct: 294 FLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLS 331


>AK122580-1|BAC56921.1|  233|Homo sapiens FLJ00202 protein protein.
          Length = 233

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 539 YLNMLEAE*SWLNNTIALRKFSISISARHNRQGQHSLT 652
           +L+ L  E SWL   I LR F +  S +     QHSL+
Sbjct: 53  FLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLS 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,082,306
Number of Sequences: 237096
Number of extensions: 1525169
Number of successful extensions: 9926
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9926
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)