Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4866
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p pro...    31   1.4  
AY071688-1|AAL49310.1|  947|Drosophila melanogaster RH10407p pro...    31   1.4  
AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-P...    31   1.4  
AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    31   1.4  
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    31   1.4  
AY075436-1|AAL68251.2|  231|Drosophila melanogaster LP09717p pro...    29   4.4  
AE014296-1703|AAF50231.1|  264|Drosophila melanogaster CG18180-P...    29   4.4  

>AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p
           protein.
          Length = 268

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 360 HFGSSRSTNGAFRYLKHRSRFSSNPSLATKGSTSKLNLRHSPLSFSPDLLS 512
           H+GS+   NGAFR    R  F S+P+   +G    + L  +P     DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRD-IGLIRTPSVGFTDLIN 144


>AY071688-1|AAL49310.1|  947|Drosophila melanogaster RH10407p
           protein.
          Length = 947

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 25/96 (26%), Positives = 43/96 (44%)
 Frame = +3

Query: 366 GSSRSTNGAFRYLKHRSRFSSNPSLATKGSTSKLNLRHSPLSFSPDLLSGSRFRSGGRFC 545
           G+S  TNG    L  +    + P  ATK +    +  +SP + S    +GSR   G    
Sbjct: 399 GASSGTNG----LLDKHELDALPQAATKSAGDGFSHSNSPTANSGAGATGSRDNDGPSSS 454

Query: 546 EARLLLEFVLATSSGLSPVCSPTS*GSAEIASQGYQ 653
            +  L + +L +SSG +P  S ++  + +   +  Q
Sbjct: 455 NSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQ 490


>AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-PA
           protein.
          Length = 268

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 360 HFGSSRSTNGAFRYLKHRSRFSSNPSLATKGSTSKLNLRHSPLSFSPDLLS 512
           H+GS+   NGAFR    R  F S+P+   +G    + L  +P     DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRD-IGLIRTPSVGFTDLIN 144


>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 25/96 (26%), Positives = 43/96 (44%)
 Frame = +3

Query: 366 GSSRSTNGAFRYLKHRSRFSSNPSLATKGSTSKLNLRHSPLSFSPDLLSGSRFRSGGRFC 545
           G+S  TNG    L  +    + P  ATK +    +  +SP + S    +GSR   G    
Sbjct: 399 GASSGTNG----LLDKHELDALPQAATKSAGDGFSHSNSPTANSGAGATGSRDNDGPSSS 454

Query: 546 EARLLLEFVLATSSGLSPVCSPTS*GSAEIASQGYQ 653
            +  L + +L +SSG +P  S ++  + +   +  Q
Sbjct: 455 NSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQ 490


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 25/96 (26%), Positives = 43/96 (44%)
 Frame = +3

Query: 366 GSSRSTNGAFRYLKHRSRFSSNPSLATKGSTSKLNLRHSPLSFSPDLLSGSRFRSGGRFC 545
           G+S  TNG    L  +    + P  ATK +    +  +SP + S    +GSR   G    
Sbjct: 670 GASSGTNG----LLDKHELDALPQAATKSAGDGFSHSNSPTANSGAGATGSRDNDGPSSS 725

Query: 546 EARLLLEFVLATSSGLSPVCSPTS*GSAEIASQGYQ 653
            +  L + +L +SSG +P  S ++  + +   +  Q
Sbjct: 726 NSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQ 761


>AY075436-1|AAL68251.2|  231|Drosophila melanogaster LP09717p
           protein.
          Length = 231

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 360 HFGSSRSTNGAFRYLKHRSRFSSNPSLATKG 452
           H+GS+   NGA+R    R  F S+P   ++G
Sbjct: 92  HYGSNWGWNGAYRQTVRRDNFISHPDWPSQG 122


>AE014296-1703|AAF50231.1|  264|Drosophila melanogaster CG18180-PA
           protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 360 HFGSSRSTNGAFRYLKHRSRFSSNPSLATKG 452
           H+GS+   NGA+R    R  F S+P   ++G
Sbjct: 91  HYGSNWGWNGAYRQTVRRDNFISHPDWPSQG 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,462,454
Number of Sequences: 53049
Number of extensions: 420046
Number of successful extensions: 831
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)