Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4863
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.8  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   5.0  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   5.0  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   6.7  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   6.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = -3

Query: 160  EHIKTNKRIRVKMNRKHNDKLIYYVRKSGHEIQSI 56
            EH  T+  + V+ N       +Y  + + H++Q++
Sbjct: 3342 EHCATDSSVHVRRNANSKIDFLYAGQTNSHKVQNV 3376


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 96  ISLSLCFLFIFTLIRLLVLMCSVLF 170
           +SL+LC    F L  L+V  CS+ F
Sbjct: 54  VSLTLCERAYFFLTFLVVTACSIYF 78


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 96  ISLSLCFLFIFTLIRLLVLMCSVLF 170
           +SL+LC    F L  L+V  CS+ F
Sbjct: 54  VSLTLCERAYFFLTFLVVTACSIYF 78


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 433 FHVPCFTILELIVYF 477
           F +PCF +L   +Y+
Sbjct: 565 FAIPCFVVLTFFIYY 579


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 385 NLEINVRLTNTIIPK 429
           N+E+ +R TNT+I +
Sbjct: 672 NIEVQIRFTNTVIAR 686


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,649
Number of Sequences: 2352
Number of extensions: 10010
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)