Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4860
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0202 - 9874205-9874762 37 0.019
10_07_0034 - 12163944-12164537 36 0.033
07_03_0675 + 20611460-20612053 36 0.033
04_01_0209 + 2603411-2603538,2603580-2604096 35 0.058
02_02_0210 + 7873962-7874753 35 0.058
02_02_0209 + 7866348-7867139 35 0.058
03_05_0024 - 19934529-19935298,19935359-19935871,19936147-199366... 34 0.10
05_03_0509 + 14858250-14858545,14859139-14859243,14859345-14859912 34 0.13
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 33 0.23
07_03_0061 + 12972944-12973054,12974509-12974536,12974701-129748... 31 0.71
08_02_1474 - 27365548-27366054 31 0.94
05_01_0472 + 3772633-3773145 31 0.94
09_04_0130 - 14905044-14905505,14905865-14905933,14906000-149061... 31 1.2
09_01_0004 - 133130-133897 31 1.2
11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861 30 1.6
04_01_0253 - 3358090-3359052 30 2.2
02_02_0005 - 6016429-6017955 30 2.2
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 29 2.9
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 29 2.9
01_06_0803 - 32100502-32101425 29 2.9
09_04_0206 + 15607490-15607933 29 3.8
08_01_0992 + 10045182-10045917,10046225-10046685 29 3.8
06_01_1104 + 9097108-9097779 29 3.8
08_02_0313 - 15659600-15659716,15660376-15660495,15660581-156606... 29 5.0
06_01_1193 + 10264360-10264504,10264763-10264910,10268350-102687... 29 5.0
02_05_0848 + 32195610-32195625,32196078-32197585 28 6.6
02_03_0176 + 16010806-16011095,16011983-16012061,16012389-160124... 28 6.6
11_06_0549 + 24868344-24868930,24869740-24869957,24870018-248701... 28 8.8
11_06_0160 - 20794974-20795977,20796241-20796295 28 8.8
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 28 8.8
03_06_0415 - 33775143-33775305,33775438-33775565,33775654-337757... 28 8.8
>05_03_0202 - 9874205-9874762
Length = 185
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/79 (36%), Positives = 32/79 (40%)
Frame = +3
Query: 48 ALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEG 227
A A +EGR R E R R GR GDGA AGRR A G
Sbjct: 104 AAGAEEREGR--RQERASGGHRAKRRAGRGGGGGGDAGGGDGA--AGRRTVEAAQAAGGG 159
Query: 228 RRRPVHRRAVLQPVSPYGR 284
RRR RRA + + GR
Sbjct: 160 RRRGRERRAAGRGLGTTGR 178
>10_07_0034 - 12163944-12164537
Length = 197
Score = 35.9 bits (79), Expect = 0.033
Identities = 29/79 (36%), Positives = 32/79 (40%)
Frame = +3
Query: 48 ALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEG 227
A A +EGR R E R R GR GDGA AGRR A G
Sbjct: 112 AAGAEEREGR--RRERASGGHRAKRRAGRGGGGGGDAGGGDGA--AGRRTVEAAQAAGGG 167
Query: 228 RRRPVHRRAVLQPVSPYGR 284
RRR RRA + + GR
Sbjct: 168 RRRGRERRAAGRWLGTTGR 186
>07_03_0675 + 20611460-20612053
Length = 197
Score = 35.9 bits (79), Expect = 0.033
Identities = 29/79 (36%), Positives = 32/79 (40%)
Frame = +3
Query: 48 ALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEG 227
A A +EGR R E R R GR GDGA AGRR A G
Sbjct: 112 AAGAEEREGR--RRERASGGHRAKRRAGRGGGGGGDAGGGDGA--AGRRTVEAAQAAGGG 167
Query: 228 RRRPVHRRAVLQPVSPYGR 284
RRR RRA + + GR
Sbjct: 168 RRRGRERRAAGRWLGTTGR 186
>04_01_0209 + 2603411-2603538,2603580-2604096
Length = 214
Score = 35.1 bits (77), Expect = 0.058
Identities = 28/79 (35%), Positives = 31/79 (39%)
Frame = +3
Query: 48 ALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEG 227
A A +EGR R E R R GR GDGA GRR A G
Sbjct: 133 AAGAEEREGR--RRERASGGHRAKRRAGRGGGGGGDAGGGDGA--TGRRTVEAAQAAGGG 188
Query: 228 RRRPVHRRAVLQPVSPYGR 284
RRR RRA + + GR
Sbjct: 189 RRRGRERRAAGRGLGTTGR 207
>02_02_0210 + 7873962-7874753
Length = 263
Score = 35.1 bits (77), Expect = 0.058
Identities = 29/79 (36%), Positives = 32/79 (40%)
Frame = +3
Query: 48 ALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEG 227
A A +EGR R E R R GR GDGA AGRR A G
Sbjct: 178 AAGAEEREGR--RWERASGGHRAKRRAGRGGGGGGDAGGGDGA--AGRRTVEAAQAAGGG 233
Query: 228 RRRPVHRRAVLQPVSPYGR 284
RRR RRA + + GR
Sbjct: 234 RRRGRERRAAGRWLGTTGR 252
>02_02_0209 + 7866348-7867139
Length = 263
Score = 35.1 bits (77), Expect = 0.058
Identities = 29/79 (36%), Positives = 32/79 (40%)
Frame = +3
Query: 48 ALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEG 227
A A +EGR R E R R GR GDGA AGRR A G
Sbjct: 178 AAGAEEREGR--RWERASGGHRAKRRAGRGGGGGGDAGGGDGA--AGRRTVEAAQAAGGG 233
Query: 228 RRRPVHRRAVLQPVSPYGR 284
RRR RRA + + GR
Sbjct: 234 RRRGRERRAAGRWLGTTGR 252
>03_05_0024 -
19934529-19935298,19935359-19935871,19936147-19936635,
19936738-19937044,19937104-19937130
Length = 701
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +3
Query: 24 AGGAQVHGALAARPQEGRA--LRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRR 197
A V+ A P R LR++D A G + ++ VE +P R
Sbjct: 157 ATSVPVNSASVCTPTGSRVPPLRSQDYHQPSLSVAASGSNRRSRGHVERSVHSPADRHRE 216
Query: 198 RHAQDMRTEGRRRPVHRRAVL 260
RHA+ R+ RR+PV R L
Sbjct: 217 RHAEQPRSPRRRQPVDLRETL 237
>05_03_0509 + 14858250-14858545,14859139-14859243,14859345-14859912
Length = 322
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Frame = +3
Query: 33 AQVHGALAARPQEGRAL--------RAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAG 188
AQ+ G L P+ GR + RA D + A G + +S V G GA G
Sbjct: 24 AQLQGLLRDSPEAGRFVDQILHTFSRAMRALDKAAVSAAGGEGSEVQSEVTCGGGASAGG 83
Query: 189 RRRRHAQDMRTEGRRR 236
+R+ A D + RRR
Sbjct: 84 KRKAPAADRKANCRRR 99
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 21 QAGGAQVHGALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRR 200
++ G + G AR +E A R P+ +R RS++ K VV SG+G E GR+R+
Sbjct: 25 ESEGDEAGGGAGAR-EEAAAARVSRDPEPER-----RRSSSGKEVVSSGNGYAEHGRKRK 78
>07_03_0061 +
12972944-12973054,12974509-12974536,12974701-12974870,
12975878-12976043,12976122-12976425,12977155-12977350,
12977464-12977622,12978311-12978371,12978904-12978967,
12979099-12979346,12980039-12980250,12980344-12980456,
12980547-12980623,12980710-12980873,12981493-12981564,
12981565-12981760,12981813-12981854,12982358-12982440,
12982534-12982671,12982942-12983124,12983216-12983263
Length = 944
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 499 KVERAVSQLPHILPDYMLVFAVPVLTHDPAFTAYDNVAQLKIIKNCL 639
K+ A++ LPH DY LV + TH P AY + + + C+
Sbjct: 748 KLRCAITPLPHDCEDYKLVEKYLLNTHAPTHKAYSTIQTIVSVFFCI 794
>08_02_1474 - 27365548-27366054
Length = 168
Score = 31.1 bits (67), Expect = 0.94
Identities = 28/74 (37%), Positives = 32/74 (43%)
Frame = +3
Query: 6 PRDALQAGGAQVHGALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEA 185
PRD L+ GGA V GA A G A A V + HR +G A + V G E
Sbjct: 32 PRDGLERGGAAVGGASAI----GGASTAVSVGEKGGDHRWRG--AGGQRVDGMGALCGEV 85
Query: 186 GRRRRHAQDMRTEG 227
G RR D R G
Sbjct: 86 GVWRRKIGDSRRSG 99
>05_01_0472 + 3772633-3773145
Length = 170
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 123 AQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRRRPVHRR 251
A GR +K S D G RRH +D+ +E R +HRR
Sbjct: 109 ASGRHGKSKQAAPSSD---HGGNGRRHVRDVSSEKRSSSLHRR 148
>09_04_0130 -
14905044-14905505,14905865-14905933,14906000-14906104,
14906625-14906690,14907080-14907268,14907353-14907439,
14907597-14908118
Length = 499
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 27 GGAQVHGALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVE 161
GG G AA+PQ G A P QR+ +G++ S+ E
Sbjct: 221 GGGTASGGGAAQPQAGAAGGGAPAPPRQRVRARRGQATDPHSIAE 265
>09_01_0004 - 133130-133897
Length = 255
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/73 (34%), Positives = 29/73 (39%)
Frame = +3
Query: 66 QEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRRRPVH 245
+EGR R E R R GR GDG AGRR A GR+R
Sbjct: 176 REGR--RRERASGGHRAKRRAGRGGGGGGDAGGGDG--AAGRRTVEAAQAAGGGRQRGRE 231
Query: 246 RRAVLQPVSPYGR 284
RRA + + GR
Sbjct: 232 RRATGRWIGTTGR 244
>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
Length = 158
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Frame = +3
Query: 9 RDALQAGGAQVHGALAARPQEGRALRAEDV---PDAQRIHRAQGRSAAAKSVVESGDGAP 179
R + GG + G + GR E+ ++ R GR AA + E G
Sbjct: 44 RKRRRGGGRRAAGRRKEEEEAGRRKAGEEARRGAGKRKRRRGGGRRAAGRRKEEEEAGRR 103
Query: 180 EAG---RRRRHAQDMRTEGRRRPVHRRAVLQPVSPYGR*ST 293
+AG RRR + R G RR RR SPY + T
Sbjct: 104 KAGEETRRRGAGRRKRRRGGRRRRRRRRGRFLYSPYWKVDT 144
>04_01_0253 - 3358090-3359052
Length = 320
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/79 (32%), Positives = 30/79 (37%)
Frame = +3
Query: 48 ALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEG 227
A A +EGR R E R R GR GDG AGRR A G
Sbjct: 235 AAGAEKREGR--RRERASGDHRAKRRAGRGGGGSGDAGGGDG--AAGRRTVEAAQAAGGG 290
Query: 228 RRRPVHRRAVLQPVSPYGR 284
R+R R V + + GR
Sbjct: 291 RQRGRERATVGRWLGTTGR 309
>02_02_0005 - 6016429-6017955
Length = 508
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRR 233
GR+ A++V + DG EAG RRR A++ + R
Sbjct: 434 GRADVARAVSKLMDGGEEAGERRRKAKEYGEKAHR 468
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +3
Query: 60 RPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRRRP 239
R +E R AE +R R + A E E RRRR + +R E RRR
Sbjct: 217 RAEEERRAEAERAAAEERARREEEEGRARAE--EERRRREEERRRRRKEEKVREEARRRE 274
Query: 240 VHRR 251
RR
Sbjct: 275 EQRR 278
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/82 (25%), Positives = 33/82 (40%)
Frame = +3
Query: 12 DALQAGGAQVHGALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGR 191
D + + + + + AA + R+ + Q HRA G AA + G G AGR
Sbjct: 332 DGISSPASLLLPSAAAASPDSPEFRSHVIKYLQARHRAAGEEEAAAAAAREGGGGGGAGR 391
Query: 192 RRRHAQDMRTEGRRRPVHRRAV 257
A+ +R R R R +
Sbjct: 392 DEA-AKQLRMAVRMRKDRRGGI 412
>01_06_0803 - 32100502-32101425
Length = 307
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 483 VPDVLPSPHHVGHHELPDDAPYALVGLSA 397
+P +P HH GHH DD Y + +A
Sbjct: 133 LPSAMPLMHHHGHHHHADDDKYHVAAAAA 161
>09_04_0206 + 15607490-15607933
Length = 147
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +3
Query: 54 AARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVE-----SGDGAPEAGRRRRHAQDM 215
AA G ++ +P AQ++ + + AA S E G+ +PE G ++ H QD+
Sbjct: 85 AANHDGGYGAGSDPLPAAQKVRAEEVQRGAAASAPEFGGFARGESSPEYGVQQAHGQDL 143
>08_01_0992 + 10045182-10045917,10046225-10046685
Length = 398
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 114 IHRAQGRSAAAKSVVESGD-GAPEAGRRRRHAQDMRTEGRRR 236
+H GR+ V +G GA + GRRRR A+ R RRR
Sbjct: 241 LHGFVGRAVRDPEAVPAGAYGAEDGGRRRRDAERPRGARRRR 282
>06_01_1104 + 9097108-9097779
Length = 223
Score = 29.1 bits (62), Expect = 3.8
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Frame = +3
Query: 12 DALQAGGAQVHGALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAP--EA 185
D ++ G GA+ E R L A++ DA GRS A + DG P
Sbjct: 51 DEVEVGAETRRGAV-----ERRGLVADEAADAAERTGGGGRSGAGRGSRRRRDGRPWRRR 105
Query: 186 GRRRRHAQDMRTEGRRRPVHRRAVLQPVSPYGR 284
G R A E RRRPV + + GR
Sbjct: 106 GGAEREAAGADDE-RRRPVAETVADEAAAGRGR 137
>08_02_0313 -
15659600-15659716,15660376-15660495,15660581-15660679,
15660802-15660913,15661025-15661128,15661316-15661495,
15661612-15661881,15662529-15662825,15663432-15663677
Length = 514
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 57 ARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRR 200
A P A D+ R+ A+GR + V S + AGRRRR
Sbjct: 10 ASPYHAAHAAASTSCDSLRLLVAEGRPRRPRGVASSSSSSSSAGRRRR 57
>06_01_1193 +
10264360-10264504,10264763-10264910,10268350-10268748,
10268925-10271214
Length = 993
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -1
Query: 185 SLRCAISAFDNRFCCSRSPLCTMNALSIRNVFCAESSSFLRPSSQRAMHLSPSS 24
+LRC + +N F + C N + + N+F SS R +H++ S
Sbjct: 656 TLRCTRVSNNNNFSINHPVKCLTNTMCLPNIFTPSVSSDNRAKQIAELHMATKS 709
>02_05_0848 + 32195610-32195625,32196078-32197585
Length = 507
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = -3
Query: 279 HKVRQVVEL----LCGELVADAL-LFAYLEHGGAGGQPQVRHLRFRQPILLQQISLVHDE 115
H R + E+ C +V A+ F Y+ HG AG +P V LR P+ + + V E
Sbjct: 406 HNQRALAEIYLLSFCDRVVTSAVSTFGYIAHGLAGVRPWVL-LRPPSPVARAEPACVRSE 464
Query: 114 CVE 106
VE
Sbjct: 465 TVE 467
>02_03_0176 +
16010806-16011095,16011983-16012061,16012389-16012464,
16012541-16012630,16012878-16013031,16013172-16013181,
16013240-16013407,16014087-16014485,16014580-16014990
Length = 558
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/82 (28%), Positives = 32/82 (39%)
Frame = +3
Query: 18 LQAGGAQVHGALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRR 197
+ A + A AA EG + V DA+ + + A S V +G G GRR
Sbjct: 1 MSAAAEEAAAAAAAEEVEGVEAGKKGVADAKGKGKEKVVVAEEDSAVAAGSGGSGGGRRT 60
Query: 198 RHAQDMRTEGRRRPVHRRAVLQ 263
A R G + V AV +
Sbjct: 61 LVAYPARVAGYKDVVADAAVFR 82
>11_06_0549 +
24868344-24868930,24869740-24869957,24870018-24870175,
24870202-24870633,24870717-24871064
Length = 580
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 162 SGDGAPEAGRRRRHAQDMRTEGRRRPVHRRAVL 260
+GD + R RH +R GRRRP VL
Sbjct: 109 AGDRGDDDARAVRHGSGLRERGRRRPESPSGVL 141
>11_06_0160 - 20794974-20795977,20796241-20796295
Length = 352
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 6 PRDALQAGGAQVHGALAARPQEGRALR 86
PR Q GGA + A ++R Q GRALR
Sbjct: 159 PRRRRQEGGALLRRAESSRRQHGRALR 185
>09_06_0048 +
20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 66 QEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEG 227
+ G+A A+ VP+ + ++ SA ++ DGA E G + R EG
Sbjct: 278 ENGKADNADGVPEVNVVAISRDNSAENEAAAAGDDGADEEGIQMNVLNTTRGEG 331
>03_06_0415 -
33775143-33775305,33775438-33775565,33775654-33775761,
33775809-33775909,33776265-33776805,33777290-33777847
Length = 532
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 126 QGRSAAAKSVVESGDGAPEAGRRRR--HAQDMRTEGRRRPVHRRAVLQ 263
QGR ++++E DG P A RR+ A ++ + ++ +R LQ
Sbjct: 344 QGRGGNGETLIEFPDGLPTASSRRQKDKASEVEAQAKKAEAAQRRKLQ 391
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,562,990
Number of Sequences: 37544
Number of extensions: 377305
Number of successful extensions: 1715
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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