Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4860
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    28   0.26 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   1.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   1.4  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    25   3.2  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   4.2  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   4.2  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   4.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   9.7  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 0.26
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +3

Query: 9    RDALQAGGAQVHGALAARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEA 185
            R+  +A  A++HGA    P        +DV + Q  + A    AA  +  ES  G  EA
Sbjct: 1102 RERQRAARAEMHGAYQPAPSNDSDDDDDDVENRQATNAASTSEAARTAAEESRVGLTEA 1160


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 158  RKRRWRT*GWPPAPPCS-RYANRRA 229
            R+R  R  G PP PP S R A RRA
Sbjct: 1121 RRREERRAGLPPTPPASPRTAQRRA 1145


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +3

Query: 15   ALQAGGAQVHGALAARPQE-GRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGR 191
            ++  GG    G    RPQ    ++ +    ++++    +  S     V    DGAP  GR
Sbjct: 976  SMAGGGGSNGGYAVVRPQSLSLSMNSMGSDNSEQSSGGRLSSGGGPPVGTPTDGAPSEGR 1035

Query: 192  RRRHAQ 209
            R  H++
Sbjct: 1036 RLSHSK 1041


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 255 LLCGELVADALLFAY 211
           LLC   VADA++FAY
Sbjct: 11  LLCTAAVADAMVFAY 25


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 536 RMCGSCDTARSTLVPTVMFLTYSRLLTTSAIMNCRMT 426
           R+CG+    R     TVM  +  + LT S+ +N  +T
Sbjct: 29  RLCGTKSMCREMRACTVMVSSDRKRLTASSAVNACLT 65


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 120 RAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRRRPVHRRAVLQP 266
           ++Q R A   + VES     E  RR+    D R   R    ++++V QP
Sbjct: 173 QSQYRRAPISNFVESDGIWREVTRRKSRRSDNRRNERESTQYQQSVHQP 221


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 66  QEGRALRA-EDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRRRP 239
           + GR LR+ E+  DA+R   A+  + +  S+V S    PE    +     +  + RR+P
Sbjct: 171 KRGRNLRSTEEADDAKR---AKNDAPSGSSLVASAGCGPEMNETKGSWSTVVRKNRRKP 226


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 393 GRQRARQAHTERHPAVHDGRRGEETGVRQEHH 488
           G   A  +H + HP   DG  G   G R EHH
Sbjct: 447 GDSDAHLSHPD-HPDNIDGPGGGGGGSRYEHH 477


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 393 GRQRARQAHTERHPAVHDGRRGEETGVRQEHH 488
           G   A  +H + HP   DG  G   G R EHH
Sbjct: 423 GDSDAHLSHPD-HPDNIDGPGGGGGGSRYEHH 453


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,283
Number of Sequences: 2352
Number of extensions: 13714
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)