Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4860
(731 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126225-1|AAI26226.1| 1297|Homo sapiens PDS5, regulator of cohe... 181 2e-45
BC114218-1|AAI14219.1| 1337|Homo sapiens PDS5A protein protein. 181 2e-45
AF294791-1|AAM82347.1| 1297|Homo sapiens SCC-112 protein. 181 2e-45
AB014548-1|BAA31623.1| 851|Homo sapiens KIAA0648 protein protein. 181 2e-45
Z75889-1|CAI10806.2| 1447|Homo sapiens androgen-induced prolifer... 167 5e-41
U95825-1|AAD22134.2| 1391|Homo sapiens androgen-induced prostate... 167 5e-41
AL138820-1|CAH73160.2| 1447|Homo sapiens androgen-induced prolif... 167 5e-41
AL137201-1|CAB69911.1| 1447|Homo sapiens hypothetical protein pr... 167 5e-41
AB023196-1|BAA76823.2| 1483|Homo sapiens KIAA0979 protein protein. 167 5e-41
BC009650-1|AAH09650.1| 333|Homo sapiens SCC-112 protein protein. 56 1e-07
BC126449-1|AAI26450.1| 360|Homo sapiens LSM11, U7 small nuclear... 35 0.26
BC051353-1|AAH51353.1| 353|Homo sapiens LSM11 protein protein. 35 0.26
AK095592-1|BAC04581.1| 360|Homo sapiens protein ( Homo sapiens ... 35 0.26
AK096961-1|BAC04913.1| 466|Homo sapiens protein ( Homo sapiens ... 32 1.8
AK126014-1|BAC86392.1| 1233|Homo sapiens protein ( Homo sapiens ... 31 3.2
BC052625-1|AAH52625.1| 595|Homo sapiens zinc finger protein 467... 31 4.3
AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3 pr... 30 7.4
AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine recepto... 30 7.4
AJ496551-1|CAD43054.1| 90|Homo sapiens MHC class I antigen pro... 30 9.8
AJ006978-1|CAA07365.1| 182|Homo sapiens B antigen protein. 30 9.8
>BC126225-1|AAI26226.1| 1297|Homo sapiens PDS5, regulator of cohesion
maintenance, homolog A (S. cerevisiae) protein.
Length = 1297
Score = 181 bits (441), Expect = 2e-45
Identities = 93/241 (38%), Positives = 154/241 (63%), Gaps = 1/241 (0%)
Frame = +1
Query: 10 ETRCKLEGLKCMARWLLGLKKDEL-SAQKTFRMLNAFIVHKGDLLQQNRLSKAEMAHLRL 186
E K++ +K + RWLLG+K ++ SA T R+L+A +V +GDL +Q R+SK++M+ LRL
Sbjct: 791 EVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRL 850
Query: 187 AAGAAMLKICEQKGVGDQFTAEQFYNLSHLMVDEVPQVREAFAAKLHKGLSKGIPNKCLP 366
AAG+A++K+ ++ + T EQF + ++ DE QVR+ FA KLHK L K + LP
Sbjct: 851 AAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLL----LP 906
Query: 367 LDFMGMYALAGREPDKRIRSVIRQFMMADVVRRREYVRNITVGTKVERAVSQLPHILPDY 546
L++M ++AL ++P K R+ RQ ++ ++ RREY++ + T+ +L +LP+Y
Sbjct: 907 LEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATE------KLLSLLPEY 960
Query: 547 MLVFAVPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKVI 726
++ + + +L HDP FT +V QL+ IK CLWF LE L+T+N+ + F K + E +K+
Sbjct: 961 VVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLT 1020
Query: 727 K 729
+
Sbjct: 1021 R 1021
>BC114218-1|AAI14219.1| 1337|Homo sapiens PDS5A protein protein.
Length = 1337
Score = 181 bits (441), Expect = 2e-45
Identities = 93/241 (38%), Positives = 154/241 (63%), Gaps = 1/241 (0%)
Frame = +1
Query: 10 ETRCKLEGLKCMARWLLGLKKDEL-SAQKTFRMLNAFIVHKGDLLQQNRLSKAEMAHLRL 186
E K++ +K + RWLLG+K ++ SA T R+L+A +V +GDL +Q R+SK++M+ LRL
Sbjct: 831 EVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRL 890
Query: 187 AAGAAMLKICEQKGVGDQFTAEQFYNLSHLMVDEVPQVREAFAAKLHKGLSKGIPNKCLP 366
AAG+A++K+ ++ + T EQF + ++ DE QVR+ FA KLHK L K + LP
Sbjct: 891 AAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLL----LP 946
Query: 367 LDFMGMYALAGREPDKRIRSVIRQFMMADVVRRREYVRNITVGTKVERAVSQLPHILPDY 546
L++M ++AL ++P K R+ RQ ++ ++ RREY++ + T+ +L +LP+Y
Sbjct: 947 LEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATE------KLLSLLPEY 1000
Query: 547 MLVFAVPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKVI 726
++ + + +L HDP FT +V QL+ IK CLWF LE L+T+N+ + F K + E +K+
Sbjct: 1001 VVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLT 1060
Query: 727 K 729
+
Sbjct: 1061 R 1061
>AF294791-1|AAM82347.1| 1297|Homo sapiens SCC-112 protein.
Length = 1297
Score = 181 bits (441), Expect = 2e-45
Identities = 93/241 (38%), Positives = 154/241 (63%), Gaps = 1/241 (0%)
Frame = +1
Query: 10 ETRCKLEGLKCMARWLLGLKKDEL-SAQKTFRMLNAFIVHKGDLLQQNRLSKAEMAHLRL 186
E K++ +K + RWLLG+K ++ SA T R+L+A +V +GDL +Q R+SK++M+ LRL
Sbjct: 791 EVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRL 850
Query: 187 AAGAAMLKICEQKGVGDQFTAEQFYNLSHLMVDEVPQVREAFAAKLHKGLSKGIPNKCLP 366
AAG+A++K+ ++ + T EQF + ++ DE QVR+ FA KLHK L K + LP
Sbjct: 851 AAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLL----LP 906
Query: 367 LDFMGMYALAGREPDKRIRSVIRQFMMADVVRRREYVRNITVGTKVERAVSQLPHILPDY 546
L++M ++AL ++P K R+ RQ ++ ++ RREY++ + T+ +L +LP+Y
Sbjct: 907 LEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATE------KLLSLLPEY 960
Query: 547 MLVFAVPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKVI 726
++ + + +L HDP FT +V QL+ IK CLWF LE L+T+N+ + F K + E +K+
Sbjct: 961 VVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLT 1020
Query: 727 K 729
+
Sbjct: 1021 R 1021
>AB014548-1|BAA31623.1| 851|Homo sapiens KIAA0648 protein protein.
Length = 851
Score = 181 bits (441), Expect = 2e-45
Identities = 93/241 (38%), Positives = 154/241 (63%), Gaps = 1/241 (0%)
Frame = +1
Query: 10 ETRCKLEGLKCMARWLLGLKKDEL-SAQKTFRMLNAFIVHKGDLLQQNRLSKAEMAHLRL 186
E K++ +K + RWLLG+K ++ SA T R+L+A +V +GDL +Q R+SK++M+ LRL
Sbjct: 345 EVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRL 404
Query: 187 AAGAAMLKICEQKGVGDQFTAEQFYNLSHLMVDEVPQVREAFAAKLHKGLSKGIPNKCLP 366
AAG+A++K+ ++ + T EQF + ++ DE QVR+ FA KLHK L K + LP
Sbjct: 405 AAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLL----LP 460
Query: 367 LDFMGMYALAGREPDKRIRSVIRQFMMADVVRRREYVRNITVGTKVERAVSQLPHILPDY 546
L++M ++AL ++P K R+ RQ ++ ++ RREY++ + T+ +L +LP+Y
Sbjct: 461 LEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATE------KLLSLLPEY 514
Query: 547 MLVFAVPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKVI 726
++ + + +L HDP FT +V QL+ IK CLWF LE L+T+N+ + F K + E +K+
Sbjct: 515 VVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLT 574
Query: 727 K 729
+
Sbjct: 575 R 575
>Z75889-1|CAI10806.2| 1447|Homo sapiens androgen-induced proliferation
inhibitor protein.
Length = 1447
Score = 167 bits (405), Expect = 5e-41
Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 2/242 (0%)
Frame = +1
Query: 10 ETRCKLEGLKCMARWLLGLKKDEL-SAQKTFRMLNAFIVHKGDLLQQNRLSKAEMAHLRL 186
ET K++ +K M RWLLG+K + S T R+L + GDL +Q ++SK +M+ LRL
Sbjct: 821 ETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRL 880
Query: 187 AAGAAMLKICEQKGVGDQFTAEQFYNLSHLMVDEVPQVREAFAAKLHKGLSKGIPNKCLP 366
AAG+A++K+ ++ + T EQ+ + + DE QVR+ FA KLHKGLS+ LP
Sbjct: 881 AAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSR----LRLP 936
Query: 367 LDFMGMYALAGREPDKRIRSVIRQFMMADVVRRREYVRNITVGTKVERAVSQ-LPHILPD 543
L++M + AL ++P K R+ RQ ++ ++ RREY+ K AVS+ L +LP+
Sbjct: 937 LEYMAICALCAKDPVKERRAHARQCLVKNINVRREYL-------KQHAAVSEKLLSLLPE 989
Query: 544 YMLVFAVPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKV 723
Y++ + + +L HDP + ++ QLK +K CLWF LE L+ +N+ + F + ++E +K
Sbjct: 990 YVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQ 1049
Query: 724 IK 729
K
Sbjct: 1050 TK 1051
>U95825-1|AAD22134.2| 1391|Homo sapiens androgen-induced prostate
proliferative shutoff associated protein protein.
Length = 1391
Score = 167 bits (405), Expect = 5e-41
Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 2/242 (0%)
Frame = +1
Query: 10 ETRCKLEGLKCMARWLLGLKKDEL-SAQKTFRMLNAFIVHKGDLLQQNRLSKAEMAHLRL 186
ET K++ +K M RWLLG+K + S T R+L + GDL +Q ++SK +M+ LRL
Sbjct: 821 ETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRL 880
Query: 187 AAGAAMLKICEQKGVGDQFTAEQFYNLSHLMVDEVPQVREAFAAKLHKGLSKGIPNKCLP 366
AAG+A++K+ ++ + T EQ+ + + DE QVR+ FA KLHKGLS+ LP
Sbjct: 881 AAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSR----LRLP 936
Query: 367 LDFMGMYALAGREPDKRIRSVIRQFMMADVVRRREYVRNITVGTKVERAVSQ-LPHILPD 543
L++M + AL ++P K R+ RQ ++ ++ RREY+ K AVS+ L +LP+
Sbjct: 937 LEYMAICALCAKDPVKERRAHARQCLVKNINVRREYL-------KQHAAVSEKLLSLLPE 989
Query: 544 YMLVFAVPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKV 723
Y++ + + +L HDP + ++ QLK +K CLWF LE L+ +N+ + F + ++E +K
Sbjct: 990 YVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQ 1049
Query: 724 IK 729
K
Sbjct: 1050 TK 1051
>AL138820-1|CAH73160.2| 1447|Homo sapiens androgen-induced
proliferation inhibitor protein.
Length = 1447
Score = 167 bits (405), Expect = 5e-41
Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 2/242 (0%)
Frame = +1
Query: 10 ETRCKLEGLKCMARWLLGLKKDEL-SAQKTFRMLNAFIVHKGDLLQQNRLSKAEMAHLRL 186
ET K++ +K M RWLLG+K + S T R+L + GDL +Q ++SK +M+ LRL
Sbjct: 821 ETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRL 880
Query: 187 AAGAAMLKICEQKGVGDQFTAEQFYNLSHLMVDEVPQVREAFAAKLHKGLSKGIPNKCLP 366
AAG+A++K+ ++ + T EQ+ + + DE QVR+ FA KLHKGLS+ LP
Sbjct: 881 AAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSR----LRLP 936
Query: 367 LDFMGMYALAGREPDKRIRSVIRQFMMADVVRRREYVRNITVGTKVERAVSQ-LPHILPD 543
L++M + AL ++P K R+ RQ ++ ++ RREY+ K AVS+ L +LP+
Sbjct: 937 LEYMAICALCAKDPVKERRAHARQCLVKNINVRREYL-------KQHAAVSEKLLSLLPE 989
Query: 544 YMLVFAVPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKV 723
Y++ + + +L HDP + ++ QLK +K CLWF LE L+ +N+ + F + ++E +K
Sbjct: 990 YVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQ 1049
Query: 724 IK 729
K
Sbjct: 1050 TK 1051
>AL137201-1|CAB69911.1| 1447|Homo sapiens hypothetical protein
protein.
Length = 1447
Score = 167 bits (405), Expect = 5e-41
Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 2/242 (0%)
Frame = +1
Query: 10 ETRCKLEGLKCMARWLLGLKKDEL-SAQKTFRMLNAFIVHKGDLLQQNRLSKAEMAHLRL 186
ET K++ +K M RWLLG+K + S T R+L + GDL +Q ++SK +M+ LRL
Sbjct: 821 ETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRL 880
Query: 187 AAGAAMLKICEQKGVGDQFTAEQFYNLSHLMVDEVPQVREAFAAKLHKGLSKGIPNKCLP 366
AAG+A++K+ ++ + T EQ+ + + DE QVR+ FA KLHKGLS+ LP
Sbjct: 881 AAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSR----LRLP 936
Query: 367 LDFMGMYALAGREPDKRIRSVIRQFMMADVVRRREYVRNITVGTKVERAVSQ-LPHILPD 543
L++M + AL ++P K R+ RQ ++ ++ RREY+ K AVS+ L +LP+
Sbjct: 937 LEYMAICALCAKDPVKERRAHARQCLVKNINVRREYL-------KQHAAVSEKLLSLLPE 989
Query: 544 YMLVFAVPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKV 723
Y++ + + +L HDP + ++ QLK +K CLWF LE L+ +N+ + F + ++E +K
Sbjct: 990 YVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQ 1049
Query: 724 IK 729
K
Sbjct: 1050 TK 1051
>AB023196-1|BAA76823.2| 1483|Homo sapiens KIAA0979 protein protein.
Length = 1483
Score = 167 bits (405), Expect = 5e-41
Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 2/242 (0%)
Frame = +1
Query: 10 ETRCKLEGLKCMARWLLGLKKDEL-SAQKTFRMLNAFIVHKGDLLQQNRLSKAEMAHLRL 186
ET K++ +K M RWLLG+K + S T R+L + GDL +Q ++SK +M+ LRL
Sbjct: 857 ETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRL 916
Query: 187 AAGAAMLKICEQKGVGDQFTAEQFYNLSHLMVDEVPQVREAFAAKLHKGLSKGIPNKCLP 366
AAG+A++K+ ++ + T EQ+ + + DE QVR+ FA KLHKGLS+ LP
Sbjct: 917 AAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSR----LRLP 972
Query: 367 LDFMGMYALAGREPDKRIRSVIRQFMMADVVRRREYVRNITVGTKVERAVSQ-LPHILPD 543
L++M + AL ++P K R+ RQ ++ ++ RREY+ K AVS+ L +LP+
Sbjct: 973 LEYMAICALCAKDPVKERRAHARQCLVKNINVRREYL-------KQHAAVSEKLLSLLPE 1025
Query: 544 YMLVFAVPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKV 723
Y++ + + +L HDP + ++ QLK +K CLWF LE L+ +N+ + F + ++E +K
Sbjct: 1026 YVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQ 1085
Query: 724 IK 729
K
Sbjct: 1086 TK 1087
>BC009650-1|AAH09650.1| 333|Homo sapiens SCC-112 protein protein.
Length = 333
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +1
Query: 562 VPVLTHDPAFTAYDNVAQLKIIKNCLWFTLEPLITRNDFYCYGFYKSLIERMKVIK 729
+ +L HDP FT +V QL+ IK CLWF LE L+T+N+ + F K + E +K+ +
Sbjct: 2 IHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTR 57
>BC126449-1|AAI26450.1| 360|Homo sapiens LSM11, U7 small nuclear
RNA associated protein.
Length = 360
Score = 35.1 bits (77), Expect = 0.26
Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 27 GGAQVHGALAARPQEGRALRAEDVP--DAQRIHRAQGRSAAAKSVVESGDGAPEAGRR-- 194
G A G AA GR R D P D +RI R + R AK E GDGA AGRR
Sbjct: 79 GAAAGSGVPAAPGPSGRTRRRPDAPAPDPERIQRLR-RLMVAK---EEGDGAAGAGRRGP 134
Query: 195 RRHAQDMRTEGRRRPVHRRAVL 260
R + R R P+H + L
Sbjct: 135 GRSRKAPRNVLTRMPLHEGSPL 156
>BC051353-1|AAH51353.1| 353|Homo sapiens LSM11 protein protein.
Length = 353
Score = 35.1 bits (77), Expect = 0.26
Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 27 GGAQVHGALAARPQEGRALRAEDVP--DAQRIHRAQGRSAAAKSVVESGDGAPEAGRR-- 194
G A G AA GR R D P D +RI R + R AK E GDGA AGRR
Sbjct: 72 GAAAGSGVPAAPGPSGRTRRRPDAPAPDPERIQRLR-RLMVAK---EEGDGAAGAGRRGP 127
Query: 195 RRHAQDMRTEGRRRPVHRRAVL 260
R + R R P+H + L
Sbjct: 128 GRSRKAPRNVLTRMPLHEGSPL 149
>AK095592-1|BAC04581.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ38273 fis, clone FCBBF3003305. ).
Length = 360
Score = 35.1 bits (77), Expect = 0.26
Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 27 GGAQVHGALAARPQEGRALRAEDVP--DAQRIHRAQGRSAAAKSVVESGDGAPEAGRR-- 194
G A G AA GR R D P D +RI R + R AK E GDGA AGRR
Sbjct: 79 GAAAGSGVPAAPGPSGRTRRRPDAPAPDPERIQRLR-RLMVAK---EEGDGAAGAGRRGP 134
Query: 195 RRHAQDMRTEGRRRPVHRRAVL 260
R + R R P+H + L
Sbjct: 135 GRSRKAPRNVLTRMPLHEGSPL 156
>AK096961-1|BAC04913.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ39642 fis, clone SMINT2003569. ).
Length = 466
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 54 AARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRR 233
A R Q+ R LR ++ AQ +H A G+ + + S G+P R R + RTE R+
Sbjct: 382 AIRQQKMRKLRLRELRGAQ-VHTAAGKDSWDLTPDPSDPGSPAVCRVGRKCRGARTEKRK 440
Query: 234 R 236
R
Sbjct: 441 R 441
>AK126014-1|BAC86392.1| 1233|Homo sapiens protein ( Homo sapiens
cDNA FLJ44026 fis, clone TESTI4026762. ).
Length = 1233
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +3
Query: 54 AARPQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRR 233
A R ++ R+L A DA+R R + A+ +A RRR +D R E RR
Sbjct: 286 APREEQQRSLEAPRWEDAERREREERERLEAEEERRRLQAQAQAEERRRLEEDARLEERR 345
Query: 234 R 236
R
Sbjct: 346 R 346
>BC052625-1|AAH52625.1| 595|Homo sapiens zinc finger protein 467
protein.
Length = 595
Score = 31.1 bits (67), Expect = 4.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 345 HTEQMSAVRLHGHVRVGRQRARQAHTERHPAVHDGRR 455
H+ S R + GR+ +R++H RH AVH G R
Sbjct: 477 HSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSR 513
>AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3
protein.
Length = 4870
Score = 30.3 bits (65), Expect = 7.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 210 LEHGGAGGQPQVRHLRFRQPILLQQISLVHDE 115
+ GG GG+ +++ LR ++LQ I+ +H E
Sbjct: 1 MAEGGEGGEDEIQFLRTEDEVVLQCIATIHKE 32
>AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine receptor
protein.
Length = 4866
Score = 30.3 bits (65), Expect = 7.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 210 LEHGGAGGQPQVRHLRFRQPILLQQISLVHDE 115
+ GG GG+ +++ LR ++LQ I+ +H E
Sbjct: 1 MAEGGEGGEDEIQFLRTEDEVVLQCIATIHKE 32
>AJ496551-1|CAD43054.1| 90|Homo sapiens MHC class I antigen
protein.
Length = 90
Score = 29.9 bits (64), Expect = 9.8
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 63 PQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRRRPV 242
P R LR R R + A ++ +G GA G QD T+ R P
Sbjct: 20 PLHHRGLRGRHPVREVRQRRHESEDGAPGAMDRAG-GAGVLGPGDTDLQDQHTDLPREPA 78
Query: 243 HRRAVLQP 266
HR +LQP
Sbjct: 79 HRAPLLQP 86
>AJ006978-1|CAA07365.1| 182|Homo sapiens B antigen protein.
Length = 182
Score = 29.9 bits (64), Expect = 9.8
Identities = 26/85 (30%), Positives = 33/85 (38%)
Frame = +3
Query: 63 PQEGRALRAEDVPDAQRIHRAQGRSAAAKSVVESGDGAPEAGRRRRHAQDMRTEGRRRPV 242
P R LR R R + AA ++ +G GA G QD T+ R P
Sbjct: 20 PLHHRGLRGRHAVREVRQRRHESEEGAAGAMDRAG-GAGVLGPGDTDLQDQHTDLPREPA 78
Query: 243 HRRAVLQPVSPYGR*STTSEGSFRC 317
+LQP GR S T + F C
Sbjct: 79 EPAPLLQP--ERGRGSHTLQRMFGC 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,452,499
Number of Sequences: 237096
Number of extensions: 1857738
Number of successful extensions: 9521
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9479
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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