Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4857
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p pro...    32   0.92 
AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1 ...    32   0.92 
AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA...    32   0.92 
AY051907-1|AAK93331.1|  500|Drosophila melanogaster LD39658p pro...    29   8.6  
AF273478-1|AAK58692.1|  500|Drosophila melanogaster amino acid t...    29   8.6  
AE014134-2145|AAN10800.2|  500|Drosophila melanogaster CG12317-P...    29   8.6  
AE014134-2144|AAF53154.1|  500|Drosophila melanogaster CG12317-P...    29   8.6  

>AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p
           protein.
          Length = 608

 Score = 31.9 bits (69), Expect = 0.92
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 728 GAHGATIDPRGNGVVFTPARDLGLGDSGRAPPKFYEVFIHSTSTPTLG 585
           G+ G+++ PR NG   +      +G SG  P K      +S+STP  G
Sbjct: 277 GSSGSSLSPRENGTSHSHHGGCPIGCSGAVPRKPLHTLTNSSSTPISG 324


>AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1
           protein.
          Length = 526

 Score = 31.9 bits (69), Expect = 0.92
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 728 GAHGATIDPRGNGVVFTPARDLGLGDSGRAPPKFYEVFIHSTSTPTLG 585
           G+ G+++ PR NG   +      +G SG  P K      +S+STP  G
Sbjct: 195 GSSGSSLSPRENGTSHSHHGGCPIGCSGAVPRKPLHTLTNSSSTPISG 242


>AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA
           protein.
          Length = 608

 Score = 31.9 bits (69), Expect = 0.92
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 728 GAHGATIDPRGNGVVFTPARDLGLGDSGRAPPKFYEVFIHSTSTPTLG 585
           G+ G+++ PR NG   +      +G SG  P K      +S+STP  G
Sbjct: 277 GSSGSSLSPRENGTSHSHHGGCPIGCSGAVPRKPLHTLTNSSSTPISG 324


>AY051907-1|AAK93331.1|  500|Drosophila melanogaster LD39658p
           protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 695 NGVVFTPARDLGLGDSGRAPPKFYEVFIHSTSTP 594
           NGV+FT AR    G      PKF+++F     TP
Sbjct: 328 NGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTP 361


>AF273478-1|AAK58692.1|  500|Drosophila melanogaster amino acid
           transporter proteinJHI-21 protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 695 NGVVFTPARDLGLGDSGRAPPKFYEVFIHSTSTP 594
           NGV+FT AR    G      PKF+++F     TP
Sbjct: 328 NGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTP 361


>AE014134-2145|AAN10800.2|  500|Drosophila melanogaster CG12317-PB,
           isoform B protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 695 NGVVFTPARDLGLGDSGRAPPKFYEVFIHSTSTP 594
           NGV+FT AR    G      PKF+++F     TP
Sbjct: 328 NGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTP 361


>AE014134-2144|AAF53154.1|  500|Drosophila melanogaster CG12317-PA,
           isoform A protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 695 NGVVFTPARDLGLGDSGRAPPKFYEVFIHSTSTP 594
           NGV+FT AR    G      PKF+++F     TP
Sbjct: 328 NGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTP 361


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,102,098
Number of Sequences: 53049
Number of extensions: 551084
Number of successful extensions: 904
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)