Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4852
         (486 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL049694-4|CAI95775.1|  331|Homo sapiens methylenetetrahydrofola...    30   5.0  
AL035086-8|CAI42795.1|  331|Homo sapiens methylenetetrahydrofola...    30   5.0  
AL035086-5|CAI42791.1|  120|Homo sapiens methylenetetrahydrofola...    30   5.0  

>AL049694-4|CAI95775.1|  331|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1-like protein.
          Length = 331

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 215 GEAVMCFGLKSRAAVVTILETLELISQDGWRIYVVGVYGLL 337
           G+A  CF      AV+ +LE    ++ DG +I VVG +G L
Sbjct: 152 GDAHECFVSPVAKAVIELLEKSVGVNLDGKKILVVGAHGSL 192


>AL035086-8|CAI42795.1|  331|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1-like protein.
          Length = 331

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 215 GEAVMCFGLKSRAAVVTILETLELISQDGWRIYVVGVYGLL 337
           G+A  CF      AV+ +LE    ++ DG +I VVG +G L
Sbjct: 152 GDAHECFVSPVAKAVIELLEKSVGVNLDGKKILVVGAHGSL 192


>AL035086-5|CAI42791.1|  120|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1-like protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 215 GEAVMCFGLKSRAAVVTILETLELISQDGWRIYVVGVYGLL 337
           G+A  CF      AV+ +LE    ++ DG +I VVG +G L
Sbjct: 37  GDAHECFVSPVAKAVIELLEKSVGVNLDGKKILVVGAHGSL 77


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,984,509
Number of Sequences: 237096
Number of extensions: 1509035
Number of successful extensions: 2485
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)