Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4850
(424 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1475 + 33856351-33856582,33857614-33857781,33858156-338582... 31 0.29
04_03_0458 + 16141094-16141266,16141354-16141402,16143475-161437... 31 0.51
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 30 0.88
01_02_0091 - 11023912-11024017,11024112-11024185,11024478-110248... 30 0.88
06_03_0455 + 20978658-20978677,20979104-20979608 29 1.2
07_03_0103 - 13425411-13425713,13425874-13425974,13426410-134264... 29 1.5
06_01_0231 + 1775861-1776157 29 1.5
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 29 1.5
11_01_0112 + 875447-875490,875854-876359,876750-876976,877112-87... 29 2.0
06_02_0181 - 12694304-12694398,12694512-12695547 29 2.0
02_05_0533 - 29818276-29818866 28 2.7
01_05_0183 + 19001582-19003102 28 2.7
06_01_0218 + 1647624-1647757,1648044-1648112,1648493-1648549,164... 28 3.6
03_02_0066 - 5361724-5362373,5362422-5362479,5363797-5364073,536... 28 3.6
03_06_0595 - 34955345-34955464,34955495-34956256,34956384-349565... 27 4.7
05_03_0202 - 9874205-9874762 27 6.2
04_03_0662 + 18479279-18479406,18480445-18480509,18480603-184808... 27 6.2
02_05_1007 + 33452774-33452993,33453028-33453122,33453208-334533... 27 6.2
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 27 8.2
08_01_0882 - 8663006-8663068,8663260-8663328,8663410-8663515,866... 27 8.2
04_03_0382 - 15166553-15166794,15167486-15167730,15168760-15169253 27 8.2
04_01_0253 - 3358090-3359052 27 8.2
03_02_0961 + 12759701-12760054,12760294-12760420,12760719-127611... 27 8.2
>04_04_1475 +
33856351-33856582,33857614-33857781,33858156-33858261,
33858391-33858442,33858525-33858642,33858736-33858766,
33858962-33858985,33859075-33859199,33860087-33860168,
33860319-33860441,33860539-33860592,33860669-33860738,
33861276-33861309,33861824-33862170
Length = 521
Score = 31.5 bits (68), Expect = 0.29
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 11 TNDITEGRLRDPDGA-GARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEA 166
++D G ++ G G +P+ RG+G GA++ + + +A GR ++T+S A
Sbjct: 449 SDDDENGEIKGGKGRRGRKPSNRGRGRGAKKATPEPKPSARGRGRPKKTESPA 501
>04_03_0458 +
16141094-16141266,16141354-16141402,16143475-16143750,
16143940-16144050
Length = 202
Score = 30.7 bits (66), Expect = 0.51
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +2
Query: 8 GTNDITEGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDS 160
GT+ G+LR P+ GA A RG G G R + RAA G+ + TDS
Sbjct: 125 GTSTTKGGQLR-PERGGAGRAPRGGGDGRARVVGGGGRAARGQVCYGPTDS 174
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 29.9 bits (64), Expect = 0.88
Identities = 25/59 (42%), Positives = 27/59 (45%)
Frame = +2
Query: 29 GRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGREDRDRGLVHRR 205
G+ R GAGARPA RG+ RR RAA G T S R RD G RR
Sbjct: 659 GQRRGRRGAGARPAARGRCRRGRR-----GRAAGG-----ATVSAEARAPRDGGAATRR 707
>01_02_0091 - 11023912-11024017,11024112-11024185,11024478-11024834,
11024938-11025166,11025468-11025559,11026099-11026326,
11027108-11027356,11027429-11027471,11027589-11027836,
11027922-11028035,11028122-11028322,11028417-11028593,
11028725-11028853,11029210-11029287,11029369-11029464,
11029563-11029634,11031549-11031677,11032105-11032220,
11033048-11033204,11033343-11033426,11033513-11033574,
11034901-11035067,11035162-11035226,11035315-11035371,
11035547-11035633,11036638-11036703,11036810-11036908
Length = 1193
Score = 29.9 bits (64), Expect = 0.88
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 45 LTGLEPGQLYEVKVTVHDGHYFSTSELRTVD-TSID 149
L GL PG +Y V+V D H F+ E + + SID
Sbjct: 980 LRGLVPGSIYSVRVVAKDDHRFAAVERASPEYVSID 1015
>06_03_0455 + 20978658-20978677,20979104-20979608
Length = 174
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 38 RDPDGAGARPAVRGQGHGARRPLLQHQRAADGR 136
R GA ARPAV G+ RR ++ + AADGR
Sbjct: 61 RPEAGAKARPAVGGRRGRRRRRVVGAEAAADGR 93
>07_03_0103 -
13425411-13425713,13425874-13425974,13426410-13426471,
13426951-13427123
Length = 212
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +2
Query: 29 GRLRDPDGAGARPAVRGQG---HGARRPLLQHQRA 124
G R AGA P R +G HG RRP L+ +A
Sbjct: 22 GAARRQSAAGAGPCYRAEGGHCHGGRRPTLRQAKA 56
>06_01_0231 + 1775861-1776157
Length = 98
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 41 DPDGAGARPAVRGQGHGARRPLLQHQRAADGR 136
D A A A G G GA RP Q AA+GR
Sbjct: 40 DNAAASAAAAAEGTGRGATRPAEQATAAAEGR 71
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 11 TNDITEGRLRDPDGAGARPAVRGQGH 88
T D G++RD GA A P G GH
Sbjct: 542 TGDNDSGKIRDETGAAATPFAYGSGH 567
>11_01_0112 +
875447-875490,875854-876359,876750-876976,877112-877237,
877313-877359,877888-878251,878396-878779
Length = 565
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = +2
Query: 17 DITEGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGREDRDRGLV 196
DI G D DGAG + G G G R +H R + G + EA R R G+
Sbjct: 86 DIDSGIRVDDDGAGRISSGAGGGAGRRG---RHGRGSSGGSGRHGAEEEAARLGRGWGVA 142
Query: 197 HRR 205
R
Sbjct: 143 RAR 145
>06_02_0181 - 12694304-12694398,12694512-12695547
Length = 376
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 146 YGGVDRPQLAGAEVVAVVHRDLDLVQLAGLQPRQDHE 36
YGG D LAG +V VV ++ +Q+AGL HE
Sbjct: 257 YGGADGGPLAGVKVKNVVSGEVSDLQVAGLFFAIGHE 293
>02_05_0533 - 29818276-29818866
Length = 196
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +2
Query: 92 ARRPLLQHQRAADGRHLHRRTDSEAGREDRDRGLVHR 202
A R L H AD LHRR D EAGR R + R
Sbjct: 29 ASRTALSH--VADVHTLHRRVDPEAGRLQAARSITVR 63
>01_05_0183 + 19001582-19003102
Length = 506
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 88 VTLTSYSWPGSSPVRITKSSLGDVVGPAA 2
VT+ Y+ PGSSP R+ + G VV AA
Sbjct: 192 VTIVVYAMPGSSPQRVEEGVDGMVVDVAA 220
>06_01_0218 +
1647624-1647757,1648044-1648112,1648493-1648549,
1648768-1648934,1649661-1649716,1650319-1650490,
1650747-1650810,1651037-1651119,1651243-1651334,
1652028-1652134,1652398-1652461,1652630-1652770
Length = 401
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 99 GHYFSTSELRTVDTSIDGPIVKPDEKI-ATAGW 194
G + E++ I G ++PD KI ATAGW
Sbjct: 299 GAFILRKEIKLERPGIAGTAIRPDNKIAATAGW 331
>03_02_0066 -
5361724-5362373,5362422-5362479,5363797-5364073,
5364264-5364409
Length = 376
Score = 27.9 bits (59), Expect = 3.6
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 26 EGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGREDR 181
EGR RD A R R HG R R D RR D DR
Sbjct: 13 EGRERDEHDASRRERERDHTHGRRPHSSSRSRRDDPSPRRRREDRRHHESDR 64
>03_06_0595 -
34955345-34955464,34955495-34956256,34956384-34956507,
34957111-34957167,34958222-34958366,34958860-34958909,
34959366-34959514,34959955-34960146
Length = 532
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 45 LTGLEPGQLYEVKVTVHDGHYFSTSELRTVDTSIDGPIVKP 167
L GL P Q+ V V HD H S+S TS+ P+ P
Sbjct: 361 LHGLHPSQISAVPVMPHDAHR-SSSTSTIQPTSLANPLFFP 400
>05_03_0202 - 9874205-9874762
Length = 185
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 44 PDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGREDRDRG 190
PDGA AR R + GA + Q A G H +R G D G
Sbjct: 91 PDGAPARRERRLEAAGAEEREGRRQERASGGHRAKRRAGRGGGGGGDAG 139
>04_03_0662 +
18479279-18479406,18480445-18480509,18480603-18480874,
18483512-18483586,18483668-18483730,18484081-18484103,
18484170-18484260
Length = 238
Score = 27.1 bits (57), Expect = 6.2
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = +2
Query: 41 DPDGAGARPAVRGQGHGARRPLLQHQRAADGR---HLHRRTDSEAGREDRDRGL 193
D D AR G GAR P + QR D + L+R D A + R L
Sbjct: 19 DGDQPAARAGAGAGGRGARNPPSKRQRQTDEKWKHDLYREDDEPASKSIDPRDL 72
>02_05_1007 +
33452774-33452993,33453028-33453122,33453208-33453329,
33453392-33453694,33454657-33454918,33455039-33455140,
33455931-33457151,33457250-33457342
Length = 805
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 23 TEGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHL 142
TE RL+ G G+R AVR + + L + ADGR +
Sbjct: 436 TEERLKSMGGGGSRGAVRYRKYTIEEIELATEHFADGRKI 475
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 GSGTNDITEGRLRDPDGAGA-RPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGRED 178
G G +D G R G R R +G G R +H+ DG+ R + S +
Sbjct: 37 GGGRDDEERGSKRSRSGEDRDRDRDRHRGGGGGR---EHRDRDDGKEKERSSRSRGKDAE 93
Query: 179 RDRGLVHRRD 208
+DRG +D
Sbjct: 94 KDRGKDGEKD 103
>08_01_0882 -
8663006-8663068,8663260-8663328,8663410-8663515,
8663889-8663944,8664163-8664222,8664310-8664529,
8664561-8664655,8664757-8664882,8664954-8665008,
8666163-8666290
Length = 325
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 53 AGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGREDR 181
+G PAV G H RRP A H R S A R R
Sbjct: 11 SGVSPAVSGTSHRRRRPAAWRALAPPPPHAGLRLSSPAVRVPR 53
>04_03_0382 - 15166553-15166794,15167486-15167730,15168760-15169253
Length = 326
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 394 VPLLIEWRDLLSNGCVYSWKPASG*SLRPCASSRSCTSYL 275
VPL + R LL+ K S +RPC+++R T YL
Sbjct: 277 VPLAQKKRKLLAAAETLDVKQNSSVMVRPCSTARGHTGYL 316
>04_01_0253 - 3358090-3359052
Length = 320
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 44 PDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGREDRDRG 190
PDGA AR R + GA + + + A G H +R G D G
Sbjct: 222 PDGARARRERRLEAAGAEKREGRRRERASGDHRAKRRAGRGGGGSGDAG 270
>03_02_0961 +
12759701-12760054,12760294-12760420,12760719-12761167,
12761369-12761590,12761672-12761980,12762092-12762430,
12762504-12762584,12762661-12762756,12762846-12763220,
12763400-12763531,12763962-12764132
Length = 884
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 50 GAGARPAVRGQGHGARRP-LLQHQRAADGRHLHRRT--DSEAGRED 178
GAG R RG HG R P L+ Q A G R + D EAG +D
Sbjct: 32 GAGKRGDRRGGRHGPRLPTALRRQLDALGPGTSRGSDEDEEAGSDD 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,471,827
Number of Sequences: 37544
Number of extensions: 174429
Number of successful extensions: 768
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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