BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4849
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated prot... 36 0.18
AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated prot... 33 1.2
AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated prot... 33 1.2
AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein p... 31 3.8
AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated prot... 31 3.8
AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated prot... 31 3.8
AY043325-1|AAL10682.1| 1406|Homo sapiens CRB1 isoform II precurs... 31 5.0
AY043324-1|AAL10681.1| 1376|Homo sapiens CRB1 isoform I precurso... 31 5.0
AL513325-3|CAM17208.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 31 5.0
AL513325-2|CAH72584.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 31 5.0
AL139136-3|CAM21656.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 31 5.0
AL139136-2|CAI15311.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 31 5.0
AL136322-4|CAM23328.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 31 5.0
AL136322-3|CAI16646.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 31 5.0
AJ748821-1|CAG38658.1| 1294|Homo sapiens crumbs homologue 1 (alt... 31 5.0
AF154671-1|AAF01361.1| 1376|Homo sapiens CRB1 protein. 31 5.0
AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated prot... 31 5.0
AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein. 31 5.0
AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-ri... 30 6.6
AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-ri... 30 6.6
AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated prot... 30 6.6
AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein. 30 8.8
AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated prot... 30 8.8
AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated prot... 30 8.8
>AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated protein
protein.
Length = 278
Score = 35.5 bits (78), Expect = 0.18
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = -1
Query: 537 SGGG*VENG*FKDGAASVG--KRSCMSVTGYRGSV-CLSPQRSGMGIGCVRGGVSTRGCV 367
S GG G K G S G K C S G +G + G G GC GG + CV
Sbjct: 75 SKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGC--GGCGSSCCV 132
Query: 366 CGISCE--WCSMRSISCNRCGSG 304
C+ C + + SC+ CG G
Sbjct: 133 PVCCCKPMCCCVPACSCSSCGKG 155
Score = 31.1 bits (67), Expect = 3.8
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -1
Query: 498 GAASVGKRSCMSVTGYRGSV-CLSPQRSGMGIGCVRGGVSTRGC---VCGISCEWCSMRS 331
G+ K C S G +G + G G GC GG + GC VC SC C +
Sbjct: 168 GSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGC--GGCGS-GCGVPVCCCSCSSCGSCA 224
Query: 330 ISCNRCGSGVSR 295
S CGS S+
Sbjct: 225 GSKGGCGSSCSQ 236
>AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated protein
5-11 protein.
Length = 221
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Frame = -1
Query: 471 CMSVTGYRGSVC--LSPQRSGMGIGCVRGGVSTRGCV-----CGISCEWCSMRSISCNRC 313
C +G GS C L G G GC G GC CG C C C C
Sbjct: 3 CCGCSGGCGSGCGGLGSGCGGCGSGCGGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGC 62
Query: 312 GSG 304
GSG
Sbjct: 63 GSG 65
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = -1
Query: 498 GAASVGKRSCMSVTGYRGSVCLSPQRSGMGIGCVRGGVSTRGCVCGISC---EWCSMRSI 328
G G C S G GS C G G GC G GC + C C + +
Sbjct: 29 GGRGSGCGGCGSGCGGCGSGC-----GGCGSGCGGCGGCGSGCCVPVCCCKPMCCCVPAC 83
Query: 327 SCNRCGSG 304
SC+ CG G
Sbjct: 84 SCSSCGKG 91
>AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Frame = -1
Query: 471 CMSVTGYRGSVC--LSPQRSGMGIGCVRGGVSTRGCV-----CGISCEWCSMRSISCNRC 313
C +G GS C L G G GC G GC CG C C C C
Sbjct: 3 CCGCSGGCGSGCGGLGSGCGGCGSGCGGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGC 62
Query: 312 GSG 304
GSG
Sbjct: 63 GSG 65
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = -1
Query: 498 GAASVGKRSCMSVTGYRGSVCLSPQRSGMGIGCVRGGVSTRGCVCGISC---EWCSMRSI 328
G G C S G GS C G G GC G GC + C C + +
Sbjct: 29 GGRGSGCGGCGSGCGGCGSGC-----GGCGSGCGGCGGCGSGCCVPVCCCKPMCCCVPAC 83
Query: 327 SCNRCGSG 304
SC+ CG G
Sbjct: 84 SCSSCGKG 91
>AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein
protein.
Length = 187
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -1
Query: 471 CMSVTGYRGSVCLSPQRSGMGIGCVRGGVSTRGCVCGISCEWCSMRSISCNRCGS 307
C +G GS C G G GC G S R +C C + + SC+ CGS
Sbjct: 3 CCGCSGGCGSGC-----GGCGSGCGGCGSSCRVPICCCKPVCCCVPACSCSSCGS 52
>AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated protein
5-8 protein.
Length = 177
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/57 (40%), Positives = 24/57 (42%)
Frame = -1
Query: 477 RSCMSVTGYRGSVCLSPQRSGMGIGCVRGGVSTRGCVCGISCEWCSMRSISCNRCGS 307
R C S G GS C G G GC GG + CG C CS SC CGS
Sbjct: 8 RGCGSGCGGCGSSC-----GGCGSGC--GGCGSGRGGCGSGCGGCSS---SCGGCGS 54
>AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated protein
protein.
Length = 177
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/57 (40%), Positives = 24/57 (42%)
Frame = -1
Query: 477 RSCMSVTGYRGSVCLSPQRSGMGIGCVRGGVSTRGCVCGISCEWCSMRSISCNRCGS 307
R C S G GS C G G GC GG + CG C CS SC CGS
Sbjct: 8 RGCGSGCGGCGSSC-----GGCGSGC--GGCGSGRGGCGSGCGGCSS---SCGGCGS 54
>AY043325-1|AAL10682.1| 1406|Homo sapiens CRB1 isoform II precursor
protein.
Length = 1406
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 468 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 521
>AY043324-1|AAL10681.1| 1376|Homo sapiens CRB1 isoform I precursor
protein.
Length = 1376
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 468 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 521
>AL513325-3|CAM17208.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 356 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 409
>AL513325-2|CAH72584.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 468 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 521
>AL139136-3|CAM21656.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 356 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 409
>AL139136-2|CAI15311.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 468 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 521
>AL136322-4|CAM23328.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 356 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 409
>AL136322-3|CAI16646.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 468 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 521
>AJ748821-1|CAG38658.1| 1294|Homo sapiens crumbs homologue 1
(alternative protein) protein.
Length = 1294
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 356 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 409
>AF154671-1|AAF01361.1| 1376|Homo sapiens CRB1 protein.
Length = 1376
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -1
Query: 474 SCMSVTGYRGSVC-LSPQRSGMGIGCV---RGGVSTRGCVCGISCEWCSMRSIS 325
SC+ +GY GS+C ++ S G G + G V+T+G VC I+ + +++ ++
Sbjct: 468 SCLCPSGYTGSLCEIATTLSFEGDGFLWVKSGSVTTKGSVCNIALRFQTVQPMA 521
>AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated protein
protein.
Length = 202
Score = 30.7 bits (66), Expect = 5.0
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 498 GAASVGKRSCMSVTGYRGSVCLSPQRSGMGIGCVRGGVSTRGCVCGISCE--WCSMRSIS 325
G G C S G GS C G G GC GG + CV C+ C + + S
Sbjct: 8 GGCGSGCGGCGSGCGGCGSGC-----GGYGSGC--GGCGSSCCVPVCCCKPVCCCVPACS 60
Query: 324 CNRCGS 307
C+ CGS
Sbjct: 61 CSSCGS 66
>AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein.
Length = 338
Score = 30.7 bits (66), Expect = 5.0
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -1
Query: 513 G*FKDGAASVGKRSCMSVTGYRGSVC-LSPQRSGMGIGCVRGGVSTRGCVCG-ISCEWCS 340
G G +S G C S G GSVC S SG G GC GG S+ G G +S + +
Sbjct: 162 GGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGGGSGC--GGGSSGGSGSGYVSSQQVT 219
Query: 339 MRSISCN-RCGSGVSRYR 289
S + G GV R R
Sbjct: 220 QTSCAPQPSYGGGVVRRR 237
>AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/65 (36%), Positives = 27/65 (41%)
Frame = +3
Query: 360 CRTRSPWCLLRPLHNLCPCRSFGD*DIRCPCSQLRSCSSSYLRWRPRP*ISHFLLSRPRW 539
C P RPL + CP R +CP S L+ C R R RP L RPR
Sbjct: 367 CPELRPHVEPRPLPSFCPPRRLD----QCPESPLQRCPPPAPRPRLRPEPCISLEPRPRP 422
Query: 540 FPRVL 554
PR L
Sbjct: 423 LPRQL 427
>AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/65 (36%), Positives = 27/65 (41%)
Frame = +3
Query: 360 CRTRSPWCLLRPLHNLCPCRSFGD*DIRCPCSQLRSCSSSYLRWRPRP*ISHFLLSRPRW 539
C P RPL + CP R +CP S L+ C R R RP L RPR
Sbjct: 367 CPELRPHVEPRPLPSFCPPRRLD----QCPESPLQRCPPPAPRPRLRPEPCISLEPRPRP 422
Query: 540 FPRVL 554
PR L
Sbjct: 423 LPRQL 427
>AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated protein
protein.
Length = 288
Score = 30.3 bits (65), Expect = 6.6
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 498 GAASVGKRSCMSVTGYRGSVCLSPQRSGMGIGCVRGGVSTRGCVCGISCE--WCSMRSIS 325
G G C S G GS C G G GC GG + CV C+ C + + S
Sbjct: 15 GGCGSGCGGCGSGCGGCGSGC-----GGCGSGC--GGCGSSCCVPICCCKPVCCCVPACS 67
Query: 324 CNRCGS 307
C+ CGS
Sbjct: 68 CSSCGS 73
>AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein.
Length = 238
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -1
Query: 471 CMSVTGYRGSVCLSPQRSGMGIGCVRGGVSTRGCVCGISCE--WCSMRSISCNRCGS 307
C +G GS C S G G GG + CV C+ C + + SC+ CGS
Sbjct: 3 CCGCSGGCGSSCGGCGSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSCSSCGS 59
>AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated protein
protein.
Length = 156
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Frame = -1
Query: 471 CMSVTGYRGSVC--LSPQRSGMGIGCVRGGVSTRGCVCGISCE--WCSMRSISCNRCGS- 307
C +G GS C G G GC GG + CV C+ C + + SC+ CGS
Sbjct: 3 CCGCSGGCGSGCGGCGSGSGGCGSGC--GGCGSSCCVPICCCKPVCCCVPACSCSSCGSC 60
Query: 306 GVSRYRSDSFGEER 265
G S+ S G +
Sbjct: 61 GGSKGGCGSCGSSK 74
>AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated protein
protein.
Length = 238
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -1
Query: 471 CMSVTGYRGSVCLSPQRSGMGIGCVRGGVSTRGCVCGISCE--WCSMRSISCNRCGS 307
C +G GS C S G G GG + CV C+ C + + SC+ CGS
Sbjct: 3 CSGCSGGCGSSCGGCGSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSCSSCGS 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,191,853
Number of Sequences: 237096
Number of extensions: 1330683
Number of successful extensions: 3838
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3824
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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