Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4848
         (761 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protei...    32   2.6  
M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein.     32   2.6  
DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding pr...    32   2.6  
AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency ...    32   2.6  
AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency ...    32   2.6  

>X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding
           Protein-2) protein.
          Length = 2500

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 180 QFFVEPVCPL*GIPKSLNL*GRGLENLKKSRRSRHGNATGKPTICN 43
           ++F++PV PL G+P   ++ G   EN K+ +    G+    P IC+
Sbjct: 726 EYFMDPVVPLQGVP---SMFGTTCENRKRRKEKSVGDEEDTPMICS 768


>M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein.
          Length = 1833

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 180 QFFVEPVCPL*GIPKSLNL*GRGLENLKKSRRSRHGNATGKPTICN 43
           ++F++PV PL G+P   ++ G   EN K+ +    G+    P IC+
Sbjct: 59  EYFMDPVVPLQGVP---SMFGTTCENRKRRKEKSVGDEEDTPMICS 101


>DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding
           protein 1 protein.
          Length = 2446

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 180 QFFVEPVCPL*GIPKSLNL*GRGLENLKKSRRSRHGNATGKPTICN 43
           ++F++PV PL G+P   ++ G   EN K+ +    G+    P IC+
Sbjct: 672 EYFMDPVVPLQGVP---SMFGTTCENRKRRKEKSVGDEEDTPMICS 714


>AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency
           virus type I enhancer binding protein 2 protein.
          Length = 2446

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 180 QFFVEPVCPL*GIPKSLNL*GRGLENLKKSRRSRHGNATGKPTICN 43
           ++F++PV PL G+P   ++ G   EN K+ +    G+    P IC+
Sbjct: 672 EYFMDPVVPLQGVP---SMFGTTCENRKRRKEKSVGDEEDTPMICS 714


>AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency
           virus type I enhancer-binding protein 2 protein.
          Length = 2446

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 180 QFFVEPVCPL*GIPKSLNL*GRGLENLKKSRRSRHGNATGKPTICN 43
           ++F++PV PL G+P   ++ G   EN K+ +    G+    P IC+
Sbjct: 672 EYFMDPVVPLQGVP---SMFGTTCENRKRRKEKSVGDEEDTPMICS 714


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,730,218
Number of Sequences: 237096
Number of extensions: 1692792
Number of successful extensions: 2361
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2361
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)