Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4845
(633 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0467 - 9602816-9602881,9603016-9603097,9603184-9603291,960... 97 8e-21
04_04_1436 + 33591570-33591728,33594027-33594101,33594487-335945... 83 1e-16
08_01_0875 - 8584345-8584556,8584653-8584752,8584837-8584939,858... 82 4e-16
05_07_0168 + 28122429-28122650,28122651-28122725,28123066-281231... 75 4e-14
01_06_0131 - 26785733-26785816,26785990-26786092,26786411-267865... 72 4e-13
04_04_1059 + 30467324-30467452,30469008-30469082,30469439-304694... 71 1e-12
02_01_0572 - 4220947-4221167,4221339-4221438,4221525-4221627,422... 49 4e-06
06_01_0868 - 6606913-6607000,6607516-6608010,6610313-6610761,661... 33 0.25
07_03_0997 - 23203166-23203330,23203627-23203693,23203771-232038... 31 1.0
11_01_0192 - 1523572-1526097 29 2.3
09_02_0239 + 6154758-6155039 29 2.3
07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056 29 2.3
06_01_0860 - 6514921-6515034,6515125-6515196,6515344-6515400,651... 29 2.3
04_04_0339 - 24513699-24516827 29 4.1
03_05_0431 + 24221881-24224586 28 5.4
06_03_1215 - 28474019-28474079,28475658-28476739 28 7.1
06_01_0072 + 596333-597442 28 7.1
12_01_0198 - 1461305-1463812 27 9.4
11_03_0116 - 10220821-10220937,10221414-10221497,10221613-102216... 27 9.4
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 9.4
03_02_0464 - 8683232-8684596 27 9.4
>09_02_0467 -
9602816-9602881,9603016-9603097,9603184-9603291,
9603803-9603900,9603986-9604084,9604202-9604339,
9604748-9604799,9604876-9604989,9605054-9605142,
9605674-9605707,9605900-9606019,9606138-9606220
Length = 360
Score = 97.5 bits (232), Expect = 8e-21
Identities = 59/172 (34%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Frame = +3
Query: 90 KQQLFVSKQAVFDGKRAIRGGIPFVFPQFGQWAFGPQHGFARVARWHVEKMPERLPSGDV 269
K LFV AVF+G++ I GGIP FPQFG QHGFAR W + GD
Sbjct: 129 KDLLFVRPDAVFNGQKPISGGIPHCFPQFGPGTM-QQHGFARNMNWSI--TDSEANEGDP 185
Query: 270 EAVFSLMDDEFTRSMWHFQFRLTYRLILREKELHFNIGVYNPSKELTFSCQLLLHTYFKV 449
L DD ++RSMW F F+ Y++ L L + + N + + FS LH+YF
Sbjct: 186 AVTLELKDDSYSRSMWDFSFQALYKVALHSTSLSTTLKITN-TDDKPFSFNSALHSYFSA 244
Query: 450 PDVRRCQITGMHGCMFIDK---TREGAXYXETREVVTVGXWTDRIYQNTMQE 596
+ + G+ GC ++K + E RE VT + D IY E
Sbjct: 245 -SISGVSVKGLKGCKTLNKDPDPKNPLEGKEEREEVTFPGFVDCIYLGAPSE 295
>04_04_1436 +
33591570-33591728,33594027-33594101,33594487-33594543,
33594635-33594795,33594954-33595094,33595344-33595446,
33595535-33595634,33595745-33595983
Length = 344
Score = 83.4 bits (197), Expect = 1e-16
Identities = 52/171 (30%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Frame = +3
Query: 90 KQQLFVSKQAVFDGKRAIRGGIPFVFPQFGQWAFGPQHGFARVARWHVEKMPERLP---S 260
++ LFVS +A+F +AIRGGIP FPQF + HGFAR W VE P P S
Sbjct: 70 EELLFVSNKAIFKPPKAIRGGIPICFPQFSNFGNLDPHGFARNRTWSVENDPPPFPVPTS 129
Query: 261 GDVEAVFSLMDDEFTRSMWHFQFRLTYRLILRE-KELHFNIGVYNPSKE-LTFSCQLLLH 434
L E +W + R+ L +L + N + + FS H
Sbjct: 130 NKAYVDLILTHTEEDLKIWPHSYEFRLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYH 189
Query: 435 TYFKVPDVRRCQITGMHGCMFIDKTREGAXYXETREVVTVGXWTDRIYQNT 587
TYF + D+ ++ G+ ++D +E Y E + + DRIY T
Sbjct: 190 TYFSISDISEVRVEGLETLDYLDNLQERNRYTEQGDAIVFESELDRIYLGT 240
>08_01_0875 -
8584345-8584556,8584653-8584752,8584837-8584939,
8585505-8585645,8585756-8585916,8585997-8586053,
8586401-8586475,8587747-8587986
Length = 362
Score = 81.8 bits (193), Expect = 4e-16
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +3
Query: 90 KQQLFVSKQAVFDGKRAIRGGIPFVFPQFGQWAFGPQHGFARVARWHVEKMPERLPSGDV 269
++ LFVS +A+F +AIRGGIP FPQFG QHGFAR W ++ P LP
Sbjct: 97 EELLFVSSKAIFKPPKAIRGGIPICFPQFGTHGNLEQHGFARNRLWTIDDNPPPLPVNPA 156
Query: 270 EAVF---SLMDDEFTRSMWHFQFRLTYRLILREK-ELHFNIGVYNPSKE-LTFSCQLLLH 434
F L + +W F R+ L +L + N + + +FS H
Sbjct: 157 IKSFVDLILRPSDEDLKIWPHSFEFRLRVALGPNGDLSLTSRIRNTNTDGRSFSYTFAYH 216
Query: 435 TYFKVPDVRRCQITGMHGCMFIDKTREGAXYXETREVVTVGXWTDRIY 578
TYF V D+ ++ G+ ++D + + E + + D++Y
Sbjct: 217 TYFSVSDISEVRVEGLETMDYLDNLKGKERFTEQGDAIVFESEIDKVY 264
>05_07_0168 +
28122429-28122650,28122651-28122725,28123066-28123122,
28123248-28123411,28123672-28123806,28123908-28124010,
28124165-28124264,28124348-28124556
Length = 354
Score = 75.4 bits (177), Expect = 4e-14
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Frame = +3
Query: 90 KQQLFVSKQAVFDGKRAIRGGIPFVFPQFGQWAFGPQHGFARVARWHVEKMPERLPSGD- 266
++ LF S +A+F +A+RGGIP FPQFG QHGFAR W +++ L D
Sbjct: 91 EELLFTSSKAIFKPPKAMRGGIPICFPQFGNSGTLEQHGFARNRIWALDEEHPPLNQNDN 150
Query: 267 -----VEAVFSLMDDEFTRSMWHFQFRLTYRLILREKELHFNIGVYNPSKELTFSCQLLL 431
V+ + +D+ F+FRL L ++ L + N + + FS
Sbjct: 151 NSKASVDLILKPSEDDLKCWPHGFEFRLRVSL-TKDGNLSLVSRIRNVNGK-PFSFSFGY 208
Query: 432 HTYFKVPDVRRCQITGMHGCMFIDKTREGAXYXETREVVTVGXWTDRIY 578
HTY V D+ +I G+ ++D + + E + +T DR+Y
Sbjct: 209 HTYLSVSDISEVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVDRVY 257
>01_06_0131 -
26785733-26785816,26785990-26786092,26786411-26786545,
26787234-26787397,26787542-26787598,26788201-26788275,
26788410-26788511
Length = 239
Score = 71.7 bits (168), Expect = 4e-13
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 13/179 (7%)
Frame = +3
Query: 54 SVLL*CHGG*TT-------KQQLFVSKQAVFDGKRAIRGGIPFVFPQFGQWAFGPQHGFA 212
SVL+ HGG ++ LF S +A+F +A+RGGIP FPQFG QHGFA
Sbjct: 32 SVLVSLHGGQVVSWRNDRGEELLFTSSKAIFKPPKAMRGGIPICFPQFGNCGTLEQHGFA 91
Query: 213 RVARWHVEKMPERL----PSGDVEAVFSLMDDEFTRSMW-H-FQFRLTYRLILREKELHF 374
R W ++ L +G V L E W H F+FRL L + +L
Sbjct: 92 RNRLWAIDDEAPPLNHNDNNGKVSVDLLLKPSEDDLKCWPHCFEFRLRVSL-STDGDLSL 150
Query: 375 NIGVYNPSKELTFSCQLLLHTYFKVPDVRRCQITGMHGCMFIDKTREGAXYXETREVVT 551
V N + + FS HTY V D+ +I G+ ++D + + E + +T
Sbjct: 151 VSRVRNVNGK-PFSFSFAYHTYLSVSDISEVRIEGLETLDYLDNLSQRERFTEQGDAIT 208
>04_04_1059 +
30467324-30467452,30469008-30469082,30469439-30469495,
30469587-30469747,30469850-30469990,30470148-30470191,
30470854-30470972,30471039-30471138,30471347-30471453,
30471944-30471991
Length = 326
Score = 70.5 bits (165), Expect = 1e-12
Identities = 44/126 (34%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Frame = +3
Query: 99 LFVSKQAVFDGKRAIRGGIPFVFPQFGQWAFGPQHGFARVARWHVEKMPERLPSGDVEAV 278
LFVS +A F +AIRGGIP FPQFG +HGFAR W ++ P P+
Sbjct: 63 LFVSSKATFKPPKAIRGGIPICFPQFGTHGILEKHGFARNRFWAIDDNPPPFPTSTAAKA 122
Query: 279 F---SLMDDEFTRSMWHFQFRLTYRLILRE-KELHFNIGVYNPSKE-LTFSCQLLLHTYF 443
F L E +W F R+ L +L + N + + FS HTYF
Sbjct: 123 FVDLILKTSEEDLKIWPHSFEFRLRVALGPGGDLALTSRIRNTNTDGRPFSFTFAYHTYF 182
Query: 444 KVPDVR 461
V D+R
Sbjct: 183 SVSDIR 188
>02_01_0572 -
4220947-4221167,4221339-4221438,4221525-4221627,
4221896-4222036,4222162-4222319,4222752-4222826,
4222852-4222910,4223085-4223183,4223464-4223596
Length = 362
Score = 48.8 bits (111), Expect = 4e-06
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 4/174 (2%)
Frame = +3
Query: 96 QLFVSKQAVFDGKRAIRGGIPFVFPQFGQWAFGPQHGFARVARWHVEKMPERLPSGDVEA 275
Q+F+ V + R + FV +FG QHGFAR W V++ P P+
Sbjct: 97 QVFLYGGQVIFWENEYREQLLFVSRKFGNHGVLEQHGFARNRLWSVDETPPPFPATTSNC 156
Query: 276 VFSLMDDEFTRSM--WHFQFRLTYRLILREK-ELHFNIGVYNPSKE-LTFSCQLLLHTYF 443
L+ + + W F R+ L +L + N + + F +TYF
Sbjct: 157 HIDLILKQSPEDLKIWPHSFEFRLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYF 216
Query: 444 KVPDVRRCQITGMHGCMFIDKTREGAXYXETREVVTVGXWTDRIYQNTMQEHII 605
V D+ ++ G+ +ID + G E + V +++Y + + +I
Sbjct: 217 SVSDISEVRVEGLETLDYIDNLQCGKRCTEQGDAVVFESEAEKVYLSAPPKIVI 270
>06_01_0868 -
6606913-6607000,6607516-6608010,6610313-6610761,
6610863-6610979,6611892-6612863
Length = 706
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 344 PVRQPKLKVPHRPGELIVHKAEDSFHVTAGQSLGHLLDVPAGHPREPVLRSERPLP---E 174
P+R +++ +RPGE+ + Q + H +D+P H P E P P +
Sbjct: 616 PIRGARVEDLYRPGEISARAVRVEDLYRSDQRITHAVDLPL-HAPYPTAHYEVPNPAYSD 674
Query: 173 LRKNEWYTASYCP 135
+ + WY YCP
Sbjct: 675 ISQRIWY--KYCP 685
>07_03_0997 -
23203166-23203330,23203627-23203693,23203771-23203862,
23204820-23204956,23205050-23205116,23205212-23205278,
23205356-23205441,23206061-23206153,23206337-23206522,
23207316-23207372,23207455-23207582,23207662-23207731,
23207815-23207950,23208378-23208529,23208606-23208680,
23208765-23208929,23209063-23209128,23209229-23209333,
23209929-23210132,23210462-23211715
Length = 1123
Score = 30.7 bits (66), Expect = 1.0
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 227 ARREDARAIAQR*RGSCLQPYGR*VHQVDVALSVSADV-PADLA*EGAPLQHRRLQPEQG 403
A R A A R RGS +P + +A S+S+ PADL A L + L P
Sbjct: 34 ADRAAAEAAFHRLRGSHPEPLA-----LRLASSLSSPATPADLRAMAAVLLRKLLSPTPS 88
Query: 404 ADV*LSAAAP--HLLQGAGRAPLSDH 475
+D +AAAP L AG+A L H
Sbjct: 89 SDASSAAAAPVWPHLSPAGQAALKQH 114
>11_01_0192 - 1523572-1526097
Length = 841
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 180 QWAFGPQHGFARVARWHVEKMPERLPSGDVEAVFSLMDDEFTRSMWHFQFRLTYRLIL 353
+W + G R V+ + ++L S D + L+DD+F H Q +L +L +
Sbjct: 753 EWVVDGKDGVETDVRSVVKMVVDKLDSKDESWIMDLIDDQFGGEFNHLQAQLVIKLAI 810
>09_02_0239 + 6154758-6155039
Length = 93
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 504 CQ*TCSRACR*SDSGARPAP*SKCGAAADS*TSAPCSGCR 385
C C+++C S RPAP S CG A CS C+
Sbjct: 34 CHSICNQSCA---SSCRPAPISACGKACSLAGPQACSQCQ 70
>07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056
Length = 1109
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -1
Query: 489 SRACR*SDSGARPAP*SKCGAAADS*TSAPCSGCRRRC*SGAPS 358
S +C G KCGA S TS+P SGC C +G S
Sbjct: 752 SLSCENPKCGGGGGGGGKCGAFHMSATSSPPSGCSSSCVTGCSS 795
>06_01_0860 -
6514921-6515034,6515125-6515196,6515344-6515400,
6515512-6515650,6515737-6515921,6516043-6516126,
6516552-6516674,6518043-6518219,6518331-6518400,
6518478-6518574,6519022-6519097,6519240-6519329,
6519548-6519655,6520715-6520756,6520854-6521045,
6521239-6521309,6521396-6521550,6521999-6522064,
6522769-6522820,6523476-6523566,6523897-6524094,
6524173-6524267,6524361-6524485,6524586-6525016
Length = 969
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 518 TFPRLVNEHAAVHAGDLTAAHVRHLEVSVE 429
+FP V+E A D AAH+RH +V++E
Sbjct: 138 SFPYYVDEDARQLLSDCVAAHLRHKDVALE 167
>04_04_0339 - 24513699-24516827
Length = 1042
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 309 SMWHFQFRLTYRLILRE-KELHFNIGVYNPSKELTFS-CQLLLHTYFKVPDVRRCQITGM 482
S+ + QF + L E EL ++G + L S C+ LLH + V ++ QI +
Sbjct: 603 SICNLQFLKNFNLSRTEIAELPESVGKMQALQVLDLSHCEKLLHLHESVSNLVNLQILNL 662
Query: 483 HGCMFI 500
GC ++
Sbjct: 663 EGCHYL 668
>03_05_0431 + 24221881-24224586
Length = 901
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 99 IAAWLFTLHDTTVAPKRFTVHVVL 28
+A W FTL ++T+APK V+ ++
Sbjct: 271 VACWGFTLQNSTLAPKGLRVYAIV 294
>06_03_1215 - 28474019-28474079,28475658-28476739
Length = 380
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 184 HCPN*GKTNGIPPRIALLPSKTACLLTNNCCLVVHPP 74
+CP + N P LP+ T CL +C V PP
Sbjct: 125 NCPKNLRNNDAGPWSLHLPAATPCLSMESCWYSVRPP 161
>06_01_0072 + 596333-597442
Length = 369
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 184 HCPN*GKTNGIPPRIALLPSKTACLLTNNCCLVVHPP 74
+CP + + P LP+ TACL +C V PP
Sbjct: 126 NCPKNLRNDDAGPWSLHLPAATACLSMESCWYSVRPP 162
>12_01_0198 - 1461305-1463812
Length = 835
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +3
Query: 180 QWAFGPQHGFARVARWHVEKMPERLPSGDVEAVFSLMDDEFTRSMWHFQFRLTYRLIL 353
+W + G R V+ + ++L S + + L+DD+F H Q +L +L +
Sbjct: 747 EWVVDGKDGVETDVRSVVKMVVDKLDSKNESWIMDLIDDQFGGEFNHLQAQLVIKLAI 804
>11_03_0116 -
10220821-10220937,10221414-10221497,10221613-10221687,
10223267-10223318,10223367-10223413,10226277-10226333,
10226829-10226927,10229462-10229581,10229666-10229788,
10229988-10230104
Length = 296
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +1
Query: 154 YHSFFLNSGNGRSDLSTGSRGWP-AGTSRRC 243
Y SF+ G L+ G GWP A T+ C
Sbjct: 88 YSSFYRERSKGSWTLTNGENGWPIADTTAEC 118
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 52 FRCYCSVMEGEQPSSNYLLANKPFSTARGQYEAVYHSFFLNSGN 183
F C C + G P + YL PF +RGQ +Y S N N
Sbjct: 89 FTCGCRSLPGS-PGATYLAGAFPFQMSRGQ---IYTSVAANYNN 128
>03_02_0464 - 8683232-8684596
Length = 454
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 110 QTSRFRRQEGNTRRYTIRFSSIRAMGVRTSARVRAGGPLARRED 241
+ SR RR++ ++ ++RF R + A+ AG P A ED
Sbjct: 82 ERSRARRRQVSSLATSVRFYLHRIFSYSSGAKNGAGAPAAEEED 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,173,893
Number of Sequences: 37544
Number of extensions: 431297
Number of successful extensions: 1294
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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