Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4845
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060305-1|AAL25344.1|  297|Drosophila melanogaster GH14910p pro...   303   2e-82
AE014134-2388|AAF53325.1|  297|Drosophila melanogaster CG9008-PA...   303   2e-82
AE014134-2389|AAN10845.2|  191|Drosophila melanogaster CG9008-PB...   187   1e-47
AE014297-3965|AAN14079.1|  813|Drosophila melanogaster CG31082-P...    29   4.0  
AE013599-2921|AAF57537.1|  632|Drosophila melanogaster CG15904-P...    29   5.2  
AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA...    29   6.9  

>AY060305-1|AAL25344.1|  297|Drosophila melanogaster GH14910p
           protein.
          Length = 297

 Score =  303 bits (743), Expect = 2e-82
 Identities = 132/173 (76%), Positives = 155/173 (89%)
 Frame = +3

Query: 90  KQQLFVSKQAVFDGKRAIRGGIPFVFPQFGQWAFGPQHGFARVARWHVEKMPERLPSGDV 269
           ++QLFVSK A FDGK+AIRGGIPFVFPQFG W+FGPQHGFAR+ RWH+E+ P+RL +GDV
Sbjct: 41  QEQLFVSKLASFDGKKAIRGGIPFVFPQFGAWSFGPQHGFARITRWHLERPPDRLHNGDV 100

Query: 270 EAVFSLMDDEFTRSMWHFQFRLTYRLILREKELHFNIGVYNPSKELTFSCQLLLHTYFKV 449
           EA+FSLMD++FTRS+W++QFR+TYRLILREKELHF+IGVYNPSKEL+F+  +LLHTY KV
Sbjct: 101 EAIFSLMDNDFTRSIWNYQFRITYRLILREKELHFHIGVYNPSKELSFTFNMLLHTYLKV 160

Query: 450 PDVRRCQITGMHGCMFIDKTREGAXYXETREVVTVGXWTDRIYQNTMQEHIIT 608
           PDVRRCQITG+ GC FIDKTRE A Y E REVVTV  WTDRIYQ+T QEH+IT
Sbjct: 161 PDVRRCQITGLQGCHFIDKTRENALYQEGREVVTVNEWTDRIYQHTPQEHVIT 213



 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +2

Query: 2   SVVVLDRGNNTTCTVNLFGATVVSWRVNNQAAIIC*QTSRF 124
           SVVVLDRGNNTTCT+NL GATVVSWRVNNQ  +   + + F
Sbjct: 12  SVVVLDRGNNTTCTINLHGATVVSWRVNNQEQLFVSKLASF 52


>AE014134-2388|AAF53325.1|  297|Drosophila melanogaster CG9008-PA,
           isoform A protein.
          Length = 297

 Score =  303 bits (743), Expect = 2e-82
 Identities = 132/173 (76%), Positives = 155/173 (89%)
 Frame = +3

Query: 90  KQQLFVSKQAVFDGKRAIRGGIPFVFPQFGQWAFGPQHGFARVARWHVEKMPERLPSGDV 269
           ++QLFVSK A FDGK+AIRGGIPFVFPQFG W+FGPQHGFAR+ RWH+E+ P+RL +GDV
Sbjct: 41  QEQLFVSKLASFDGKKAIRGGIPFVFPQFGAWSFGPQHGFARITRWHLERPPDRLHNGDV 100

Query: 270 EAVFSLMDDEFTRSMWHFQFRLTYRLILREKELHFNIGVYNPSKELTFSCQLLLHTYFKV 449
           EA+FSLMD++FTRS+W++QFR+TYRLILREKELHF+IGVYNPSKEL+F+  +LLHTY KV
Sbjct: 101 EAIFSLMDNDFTRSIWNYQFRITYRLILREKELHFHIGVYNPSKELSFTFNMLLHTYLKV 160

Query: 450 PDVRRCQITGMHGCMFIDKTREGAXYXETREVVTVGXWTDRIYQNTMQEHIIT 608
           PDVRRCQITG+ GC FIDKTRE A Y E REVVTV  WTDRIYQ+T QEH+IT
Sbjct: 161 PDVRRCQITGLQGCHFIDKTRENALYQEGREVVTVNEWTDRIYQHTPQEHVIT 213



 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +2

Query: 2   SVVVLDRGNNTTCTVNLFGATVVSWRVNNQAAIIC*QTSRF 124
           SVVVLDRGNNTTCT+NL GATVVSWRVNNQ  +   + + F
Sbjct: 12  SVVVLDRGNNTTCTINLHGATVVSWRVNNQEQLFVSKLASF 52


>AE014134-2389|AAN10845.2|  191|Drosophila melanogaster CG9008-PB,
           isoform B protein.
          Length = 191

 Score =  187 bits (455), Expect = 1e-47
 Identities = 82/107 (76%), Positives = 95/107 (88%)
 Frame = +3

Query: 288 MDDEFTRSMWHFQFRLTYRLILREKELHFNIGVYNPSKELTFSCQLLLHTYFKVPDVRRC 467
           MD++FTRS+W++QFR+TYRLILREKELHF+IGVYNPSKEL+F+  +LLHTY KVPDVRRC
Sbjct: 1   MDNDFTRSIWNYQFRITYRLILREKELHFHIGVYNPSKELSFTFNMLLHTYLKVPDVRRC 60

Query: 468 QITGMHGCMFIDKTREGAXYXETREVVTVGXWTDRIYQNTMQEHIIT 608
           QITG+ GC FIDKTRE A Y E REVVTV  WTDRIYQ+T QEH+IT
Sbjct: 61  QITGLQGCHFIDKTRENALYQEGREVVTVNEWTDRIYQHTPQEHVIT 107


>AE014297-3965|AAN14079.1|  813|Drosophila melanogaster CG31082-PA
           protein.
          Length = 813

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 23/73 (31%), Positives = 31/73 (42%)
 Frame = +1

Query: 67  SVMEGEQPSSNYLLANKPFSTARGQYEAVYHSFFLNSGNGRSDLSTGSRGWPAGTSRRCP 246
           S+ EG  PSS Y  A + +ST   + EA+Y +         SD S   R   + T    P
Sbjct: 691 SLGEGSVPSSYYETAEEIYSTI--EEEAIYSNTSFFDSRRSSDTSVSCRASKSPTPPPLP 748

Query: 247 SDCPAVTWKLSSA 285
              P    KL +A
Sbjct: 749 PKRPLKPTKLRTA 761


>AE013599-2921|AAF57537.1|  632|Drosophila melanogaster CG15904-PA
           protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 293 VHKAEDSFHVTAGQSLGHLLDVPAGHPREPVLRSERPLPELRKN 162
           V +AE+ FH  A    G+L+  P  +    V +S+RP     KN
Sbjct: 197 VWQAEEFFHKYAKNMKGYLVRTPILYDMPRVFKSDRPTNRYEKN 240


>AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA
           protein.
          Length = 3396

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = -2

Query: 332 PKLKVPHRPGELIVHKAEDSFHVTAGQSLGHLLDVPAGHPREPVLRSER 186
           PKL +    GE+++    D+ H  AG S     D P   P    L S R
Sbjct: 353 PKLTLTASSGEMLIKFTSDALHNAAGWSATFSADCPELQPGIGALASSR 401


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,339,145
Number of Sequences: 53049
Number of extensions: 694739
Number of successful extensions: 1907
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)